RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 PSMC2P35998 433 aaKnown RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 PPP1R21Q6ZMI0 780 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 GTF3C2Q8WUA4 911 aaPredicted RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 SLIT1O75093 1534 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 OATP04181 439 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 SYCE1Q8N0S2 351 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 K7ERI5 159 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 ECE1P42892 770 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 RSRC2Q7L4I2 434 aaKnown RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 PAIP2Q9BPZ3 127 aaKnown RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
IRF1-208ENST00000472045 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
IRF1-208ENST00000472045 MCM6Q14566 821 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 TRIM50Q86XT4 487 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 FAM186BQ8IYM0 893 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 IFT81Q8WYA0 676 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 SPATA33Q96N06 139 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 GSDMAQ96QA5 445 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 TMEM39BQ9GZU3 492 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 WDR19Q8NEZ3 1342 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ELF1P32519 619 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 EPHX2P34913 555 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 PRELPP51888 382 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 GPR161Q8N6U8 529 aaKnown RBP13.43□□□□□ -0.26
IRF1-208ENST00000472045 PCIF1Q9H4Z3 704 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 RPF1Q9H9Y2 349 aaKnown RBP13.43□□□□□ -0.26
IRF1-208ENST00000472045 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 RCAN1P53805 252 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 KRT81Q14533 505 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 PDIA6Q15084 440 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 LRRC41Q15345 812 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ZNF302Q9NR11 478 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 FAM170AA1A519 330 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 CDC25AP30304 524 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 MFAP3P55082 362 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 BPIFB4P59827 614 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 PPP2R3AQ06190 1150 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 BHMT2Q9H2M3 363 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 SCAF8Q9UPN6 1271 aaKnown RBP13.43□□□□□ -0.26
IRF1-208ENST00000472045 PCDHB4Q9Y5E5 795 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ZNF75DP51815 510 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 PTK2Q05397 1052 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 ALCAMQ13740 583 aa13.43□□□□□ -0.26
IRF1-208ENST00000472045 PHKA2P46019 1235 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 VAV2P52735 878 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 SURF1Q15526 300 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 HADHQ16836 314 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 SYT10Q6XYQ8 523 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 ATP8B3O60423 1300 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 SRGNP10124 158 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 PLCG1P19174 1290 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 ABCB4P21439 1286 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 TYW5A2RUC4 315 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 SFNP31947 248 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 RASSF7Q02833 373 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 ARL6IP4Q66PJ3 421 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 PRDM5Q9NQX1 630 aaPredicted RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 MYL1P05976 194 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 RNASE9P60153 205 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
IRF1-208ENST00000472045 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 MSTO1Q9BUK6 570 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 RIC8AQ9NPQ8 531 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 IMPACTQ9P2X3 320 aa13.42□□□□□ -0.26
IRF1-208ENST00000472045 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 CLIC2O15247 247 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
IRF1-208ENST00000472045 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 KCNV1Q6PIU1 500 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 ZNF512BQ96KM6 892 aaPredicted RBP13.41□□□□□ -0.26
IRF1-208ENST00000472045 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 CTNND1O60716 968 aaKnown RBP13.41□□□□□ -0.26
IRF1-208ENST00000472045 XRCC6P12956 609 aaKnown RBP eCLIP13.41□□□□□ -0.26
IRF1-208ENST00000472045 TUBB4BP68371 445 aa13.41□□□□□ -0.26
IRF1-208ENST00000472045 HDLBPQ00341 1268 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms