RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 ZBTB37Q5TC79 503 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 MPRIPQ6WCQ1 1025 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 MTERF4Q7Z6M4 381 aaKnown RBP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 LILRA2Q8N149 483 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 TMEM87AQ8NBN3 555 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 GPT2Q8TD30 523 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 DACT3Q96B18 629 aaPredicted RBP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 SIGLEC10Q96LC7 697 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 ADAMTS10Q9H324 1103 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 ZNF552Q9H707 407 aaPredicted RBP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 FAM8A1Q9UBU6 413 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 TPX2Q9ULW0 747 aaKnown RBP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 ZKSCAN5Q9Y2L8 839 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 IRAK3Q9Y616 596 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 DDX49Q9Y6V7 483 aaKnown RBP4.36□□□□□ -1.71
CSMD2-208ENST00000471438 PKD1L2Q7Z442 2459 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 PTPRUQ92729 1446 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 C1orf167Q5SNV9 1468 aa4.36□□□□□ -1.71
CSMD2-208ENST00000471438 HMMRO75330 724 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 LRIG2O94898 1065 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 PDIA4P13667 645 aaKnown RBP4.35□□□□□ -1.71
CSMD2-208ENST00000471438 PDE6BP35913 854 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 PDE1AP54750 535 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 ATP8B2P98198 1209 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 PCNX4Q63HM2 1172 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 CASC1Q6TDU7 716 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 SV2BQ7L1I2 683 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 FAM184AQ8NB25 1140 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 SLC16A11Q8NCK7 471 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 ANP32BQ92688 251 aaKnown RBP4.35□□□□□ -1.71
CSMD2-208ENST00000471438 NAP1L5Q96NT1 182 aaPredicted RBP4.35□□□□□ -1.71
CSMD2-208ENST00000471438 C12orf49Q9H741 205 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 CAPN6Q9Y6Q1 641 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 TTC21BQ7Z4L5 1316 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 LMO7Q8WWI1 1683 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
CSMD2-208ENST00000471438 A0A0C4DFX4 3053 aa4.35□□□□□ -1.71
CSMD2-208ENST00000471438 PATL2C9JE40 543 aaKnown RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 DYNC1I1O14576 645 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 LETM1O95202 739 aaPredicted RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 FSHBP01225 129 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 USP17L7P0C7H9 530 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 TNFRSF1AP19438 455 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 GTF2F1P35269 517 aaKnown RBP eCLIP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 HMGA2P52926 109 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 ETF1P62495 437 aaKnown RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 SLC15A2Q16348 729 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 VMACQ2NL98 169 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 ARMCX6Q7L4S7 300 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 FRMD5Q7Z6J6 570 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 UBE3DQ7Z6J8 389 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 COG3Q96JB2 828 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 SORCS2Q96PQ0 1159 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 MENTQ9BUN1 341 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 STK26Q9P289 416 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 TTF2Q9UNY4 1162 aaKnown RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 SNCAIPQ9Y6H5 919 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 USP42Q9H9J4 1324 aaKnown RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 C10orf71Q711Q0 1435 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 PXDNQ92626 1479 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 PIK3C2AO00443 1686 aa4.34□□□□□ -1.71
CSMD2-208ENST00000471438 TNRC6CQ9HCJ0 1690 aaKnown RBP4.34□□□□□ -1.71
CSMD2-208ENST00000471438 USP6P35125 1406 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 METP08581 1390 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 RPAP1Q9BWH6 1393 aaPredicted RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 TTC21AQ8NDW8 1320 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 PRAMEF27A3QJZ7 478 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 RAB11FIP3O75154 756 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 PRPF40AO75400 957 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 ESR1P03372 595 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 LDHBP07195 334 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 GNAI3P08754 354 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 CELA3AP09093 270 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 HMOX1P09601 288 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 CYP7A1P22680 504 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 EIF4BP23588 611 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 MSNP26038 577 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 CHMLP26374 656 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 HSPA4P34932 840 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 PKP1Q13835 747 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 EIF4A2Q14240 407 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 ZNF827Q17R98 1081 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 ZNF746Q6NUN9 644 aaPredicted RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 CAVIN1Q6NZI2 390 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 TMPRSS7Q7RTY8 843 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 WAPLQ7Z5K2 1190 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 NME9Q86XW9 330 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 HID1Q8IV36 788 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 OXR1Q8N573 874 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 MFSD2AQ8NA29 543 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 PDZD8Q8NEN9 1154 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 SSH3Q8TE77 659 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 TMX3Q96JJ7 454 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 THUMPD2Q9BTF0 503 aaKnown RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 ALDH8A1Q9H2A2 487 aaPredicted RBP4.33□□□□□ -1.72
CSMD2-208ENST00000471438 SP110Q9HB58 689 aa4.33□□□□□ -1.72
CSMD2-208ENST00000471438 LUC7LQ9NQ29 371 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms