RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 CRIPAKQ8N1N5 446 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 FAM160A2Q8N612 972 aaPredicted RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 OR6J1Q8NGC5 347 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 CAGE1Q8TC20 777 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 SCFD2Q8WU76 684 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 NAPBQ9H115 298 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 CERS4Q9HA82 394 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 PDGFCQ9NRA1 345 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 ZBTB40Q9NUA8 1239 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 TRMT13Q9NUP7 481 aaKnown RBP10.44□□□□□ -0.74
XRN1-208ENST00000470537 MYH4Q9Y623 1939 aa10.44□□□□□ -0.74
XRN1-208ENST00000470537 PLIN4Q96Q06 1357 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 GBF1Q92538 1859 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 ZNF536O15090 1300 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 TSPY2A6NKD2 308 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 PI4K2BG5E9Z4 385 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 GPR37O15354 613 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 GCGRP47871 477 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 PDE4DQ08499 809 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 PPP2R5BQ15173 497 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 CSPP1Q1MSJ5 1256 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 OSBP2Q969R2 916 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 CRBNQ96SW2 442 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 MAF1Q9H063 256 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 TOR4AQ9NXH8 423 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 CTNNA3Q9UI47 895 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 MYH7P12883 1935 aa10.43□□□□□ -0.74
XRN1-208ENST00000470537 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
XRN1-208ENST00000470537 ABHD14A-ACY1A0A1B0GW23 586 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
XRN1-208ENST00000470537 PTPDC1A2A3K4 754 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 A6NJR5 290 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 RFXAPO00287 272 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 ALDH5A1P51649 535 aaPredicted RBP10.42□□□□□ -0.74
XRN1-208ENST00000470537 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
XRN1-208ENST00000470537 GRB10Q13322 594 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 BAATQ14032 418 aaPredicted RBP10.42□□□□□ -0.74
XRN1-208ENST00000470537 SIRT2Q8IXJ6 389 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 DNERQ8NFT8 737 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 AFAP1L1Q8TED9 768 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 RAD9AQ99638 391 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 KCNH6Q9H252 994 aa10.42□□□□□ -0.74
XRN1-208ENST00000470537 AXIN1O15169 862 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
XRN1-208ENST00000470537 PPARAQ07869 468 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 IKBKEQ14164 716 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 PTGISQ16647 500 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 MUM1L1Q5H9M0 696 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 TREML4Q6UXN2 200 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 GJD3Q8N144 294 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 PIEZO1Q92508 2521 aa10.41□□□□□ -0.74
XRN1-208ENST00000470537 AVPP01185 164 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 CHGBP05060 677 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 TXNP10599 105 aaKnown RBP10.4□□□□□ -0.74
XRN1-208ENST00000470537 CASTP20810 708 aaKnown RBP10.4□□□□□ -0.74
XRN1-208ENST00000470537 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
XRN1-208ENST00000470537 PTPROQ16827 1216 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 CNKSR3Q6P9H4 555 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 VWCEQ96DN2 955 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
XRN1-208ENST00000470537 RANBP17Q9H2T7 1088 aaKnown RBP10.4□□□□□ -0.74
XRN1-208ENST00000470537 DACH1Q9UI36 760 aa10.4□□□□□ -0.74
XRN1-208ENST00000470537 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
XRN1-208ENST00000470537 SELPP16109 830 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 CALML3P27482 149 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 ERVK-21P61565 698 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 CTC1Q2NKJ3 1217 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 LEXMQ3ZCV2 418 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 SESTD1Q86VW0 696 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
XRN1-208ENST00000470537 EPB41L4AQ9HCS5 686 aaPredicted RBP10.39□□□□□ -0.75
XRN1-208ENST00000470537 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
XRN1-208ENST00000470537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.38□□□□□ -0.75
XRN1-208ENST00000470537 TTC24A2A3L6 582 aaPredicted RBP10.38□□□□□ -0.75
XRN1-208ENST00000470537 EPOPA6NHQ4 379 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 NCK2O43639 380 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 LPXNO60711 386 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 GJB5O95377 273 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 TOP1P11387 765 aaKnown RBP10.38□□□□□ -0.75
XRN1-208ENST00000470537 WDR5P61964 334 aaKnown RBP10.38□□□□□ -0.75
XRN1-208ENST00000470537 DGKDQ16760 1214 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 KRT40Q6A162 431 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 LRRC8DQ7L1W4 858 aa10.38□□□□□ -0.75
XRN1-208ENST00000470537 FAM178BQ8IXR5 827 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms