RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FRMPD4Q14CM0 1322 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 GGPS1O95749 300 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 ATP2A2P16615 1042 aaKnown RBP36.18■■■■□ 3.38
HMG20B-209ENST00000470356 SP2Q02086 613 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 COL9A3Q14050 684 aaPredicted RBP36.18■■■■□ 3.38
HMG20B-209ENST00000470356 MFSD10Q14728 455 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 CENPQQ7L2Z9 268 aaPredicted RBP36.18■■■■□ 3.38
HMG20B-209ENST00000470356 ZFP91Q96JP5 570 aaPredicted RBP36.18■■■■□ 3.38
HMG20B-209ENST00000470356 SPATA33Q96N06 139 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 SLC28A3Q9HAS3 691 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 HDAC6Q9UBN7 1215 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 PCDHA11Q9Y5I1 949 aa36.18■■■■□ 3.38
HMG20B-209ENST00000470356 CCDC69A6NI79 296 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 ZNF286BP0CG31 522 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 UBA1P22314 1058 aaKnown RBP36.17■■■■□ 3.38
HMG20B-209ENST00000470356 KIAA0753Q2KHM9 967 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 HSDL1Q3SXM5 330 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 AFAP1L1Q8TED9 768 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 ALG1Q9BT22 464 aa36.17■■■■□ 3.38
HMG20B-209ENST00000470356 STAM2O75886 525 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 CALM1P0DP23 149 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 CALM2P0DP24 149 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 CALM3P0DP25 149 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 RABGGTBP53611 331 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 GPKOWQ92917 476 aaPredicted RBP eCLIP36.16■■■■□ 3.38
HMG20B-209ENST00000470356 GAS2L1Q99501 681 aaPredicted RBP36.16■■■■□ 3.38
HMG20B-209ENST00000470356 PRDM12Q9H4Q4 367 aa36.16■■■■□ 3.38
HMG20B-209ENST00000470356 SEC63Q9UGP8 760 aaKnown RBP36.16■■■■□ 3.38
HMG20B-209ENST00000470356 MRPS9P82933 396 aaKnown RBP36.15■■■■□ 3.38
HMG20B-209ENST00000470356 RBL2Q08999 1139 aa36.15■■■■□ 3.38
HMG20B-209ENST00000470356 SRBD1Q8N5C6 995 aaKnown RBP36.15■■■■□ 3.38
HMG20B-209ENST00000470356 DHX38Q92620 1227 aaKnown RBP36.15■■■■□ 3.38
HMG20B-209ENST00000470356 FTOQ9C0B1 505 aaKnown RBP eCLIP36.15■■■■□ 3.38
HMG20B-209ENST00000470356 GNPTABQ3T906 1256 aa36.14■■■■□ 3.38
HMG20B-209ENST00000470356 INPP4AQ96PE3 977 aaPredicted RBP36.14■■■■□ 3.38
HMG20B-209ENST00000470356 MLXIPQ9HAP2 919 aa36.14■■■■□ 3.38
HMG20B-209ENST00000470356 CHD7Q9P2D1 2997 aa36.14■■■■□ 3.38
HMG20B-209ENST00000470356 PIK3CDO00329 1044 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 SORBS3O60504 671 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 PLEKHA8P1O95397 391 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 SELPP16109 830 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 ICAM3P32942 547 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 SMARCC2Q8TAQ2 1214 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 CUL5Q93034 780 aa36.13■■■■□ 3.37
HMG20B-209ENST00000470356 USP17L6PQ6QN14 398 aa36.12■■■■□ 3.37
HMG20B-209ENST00000470356 SKAP1Q86WV1 359 aa36.12■■■■□ 3.37
HMG20B-209ENST00000470356 PHOSPHO2Q8TCD6 241 aa36.12■■■■□ 3.37
HMG20B-209ENST00000470356 COL25A1Q9BXS0 654 aaPredicted RBP36.12■■■■□ 3.37
HMG20B-209ENST00000470356 SLC12A7Q9Y666 1083 aa36.12■■■■□ 3.37
HMG20B-209ENST00000470356 SPATA31C2B4DYI2 1134 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 MEIS2O14770 477 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 PARNO95453 639 aaKnown RBP36.11■■■■□ 3.37
HMG20B-209ENST00000470356 PTK7Q13308 1070 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 RNF20Q5VTR2 975 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 LRRC8DQ7L1W4 858 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 SLC9A7Q96T83 725 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 C16orf70Q9BSU1 422 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 TTC28Q96AY4 2481 aa36.11■■■■□ 3.37
HMG20B-209ENST00000470356 MYOGP15173 224 aa36.1■■■■□ 3.37
HMG20B-209ENST00000470356 RXRAP19793 462 aa36.1■■■■□ 3.37
HMG20B-209ENST00000470356 GPNMBQ14956 572 aa36.1■■■■□ 3.37
HMG20B-209ENST00000470356 XRRA1Q6P2D8 792 aa36.1■■■■□ 3.37
HMG20B-209ENST00000470356 CMTR1Q8N1G2 835 aaKnown RBP36.1■■■■□ 3.37
HMG20B-209ENST00000470356 BCAS3Q9H6U6 928 aa36.1■■■■□ 3.37
HMG20B-209ENST00000470356 BAIAP3O94812 1187 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 CKBP12277 381 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 NEDD9Q14511 834 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 PCNX4Q63HM2 1172 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 PPP2R2DQ66LE6 453 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 SGMS1Q86VZ5 419 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 USP38Q8NB14 1042 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 FANCBQ8NB91 859 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 LRRC2Q9BYS8 371 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 RTEL1Q9NZ71 1219 aa36.09■■■■□ 3.37
HMG20B-209ENST00000470356 FIBPO43427 364 aa36.08■■■■□ 3.37
HMG20B-209ENST00000470356 SEMA3FQ13275 785 aa36.08■■■■□ 3.37
HMG20B-209ENST00000470356 DOCK5Q9H7D0 1870 aa36.07■■■■□ 3.37
HMG20B-209ENST00000470356 ADGRE1Q14246 886 aa36.07■■■■□ 3.36
HMG20B-209ENST00000470356 TRIM71Q2Q1W2 868 aaKnown RBP36.07■■■■□ 3.36
HMG20B-209ENST00000470356 METTL7BQ6UX53 244 aa36.07■■■■□ 3.36
HMG20B-209ENST00000470356 PSTPIP2Q9H939 334 aa36.07■■■■□ 3.36
HMG20B-209ENST00000470356 H3BRB1 525 aa36.06■■■■□ 3.36
HMG20B-209ENST00000470356 ZNF200P98182 395 aaPredicted RBP36.06■■■■□ 3.36
HMG20B-209ENST00000470356 TMTC3Q6ZXV5 915 aa36.06■■■■□ 3.36
HMG20B-209ENST00000470356 TUT1Q9H6E5 874 aaKnown RBP36.06■■■■□ 3.36
HMG20B-209ENST00000470356 NOP56O00567 594 aaKnown RBP36.05■■■■□ 3.36
HMG20B-209ENST00000470356 CXCL10P02778 98 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 HIC1Q14526 733 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 CYFIP1Q7L576 1253 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 RAB11FIP4Q86YS3 637 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 NEK1Q96PY6 1258 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 USP26Q9BXU7 913 aa36.05■■■■□ 3.36
HMG20B-209ENST00000470356 LGALS2P05162 132 aa36.04■■■■□ 3.36
HMG20B-209ENST00000470356 HERC6Q8IVU3 1022 aa36.04■■■■□ 3.36
HMG20B-209ENST00000470356 SENP7Q9BQF6 1050 aa36.04■■■■□ 3.36
HMG20B-209ENST00000470356 VCANP13611 3396 aa36.03■■■■□ 3.36
HMG20B-209ENST00000470356 NBNO60934 754 aa36.03■■■■□ 3.36
HMG20B-209ENST00000470356 CA3P07451 260 aa36.03■■■■□ 3.36
HMG20B-209ENST00000470356 TSGA10IPQ3SY00 556 aa36.03■■■■□ 3.36
HMG20B-209ENST00000470356 CNKSR3Q6P9H4 555 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms