RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CAMK4Q16566 473 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 LRSAM1Q6UWE0 723 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 CABP7Q86V35 215 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 ANKRD13CQ8N6S4 541 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 MMP19Q99542 508 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
COL4A5-203ENST00000470339 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
COL4A5-203ENST00000470339 ACTN4O43707 911 aaKnown RBP17.04■□□□□ 0.32
COL4A5-203ENST00000470339 PSMD10O75832 226 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
COL4A5-203ENST00000470339 GSE1Q14687 1217 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 E2F4Q16254 413 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 KRT79Q5XKE5 535 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 NLRX1Q86UT6 975 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 GPRASP2Q96D09 838 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 CDHR1Q96JP9 859 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 WDR11Q9BZH6 1224 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 DISC1Q9NRI5 854 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
COL4A5-203ENST00000470339 A0A087X0B3 334 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 EIF3JO75822 258 aaKnown RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 ARP10275 920 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 EDNRBP24530 442 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 MAPK4P31152 587 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 ALDH5A1P51649 535 aaPredicted RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 CNTN2Q02246 1040 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 NOGQ13253 232 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 MTMR1Q13613 665 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 STXBP2Q15833 593 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 HYIQ5T013 277 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 KCTD17Q8N5Z5 321 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 PDILTQ8N807 584 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 ERMNQ8TAM6 284 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 INPP4AQ96PE3 977 aaPredicted RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 PURBQ96QR8 312 aaKnown RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 ZNF577Q9BSK1 485 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 MMTAG2Q9BU76 263 aaKnown RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 PORCNQ9H237 461 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 AGO4Q9HCK5 861 aaKnown RBP17.03■□□□□ 0.32
COL4A5-203ENST00000470339 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 TBC1D22BQ9NU19 505 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 VAV3Q9UKW4 847 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 ZNF236Q9UL36 1845 aa17.03■□□□□ 0.32
COL4A5-203ENST00000470339 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 CDC25AP30304 524 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 APLP1P51693 650 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
COL4A5-203ENST00000470339 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 GNPTABQ3T906 1256 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 DHX58Q96C10 678 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 EFCC1Q9HA90 598 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 KIAA1468Q9P260 1216 aa17.02■□□□□ 0.32
COL4A5-203ENST00000470339 LRRC37A2A6NM11 1700 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 POTEMA6NI47 508 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 TLR2O60603 784 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 GAS7O60861 476 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 ALDH1A1P00352 501 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 MYL1P05976 194 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 HSPA6P17066 643 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 ICAM3P32942 547 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 STAT6P42226 847 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
COL4A5-203ENST00000470339 HAUS3Q68CZ6 603 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 PDXDC2PQ6P474 469 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 C17orf99Q6UX52 265 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 B3GNT9Q6UX72 402 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 TEKT3Q9BXF9 490 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 NT5C3AQ9H0P0 336 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 LOXHD1Q8IVV2 1947 aa17.01■□□□□ 0.31
COL4A5-203ENST00000470339 ASTN1O14525 1302 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 WDR81Q562E7 1941 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 MUTP22033 750 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 RPA1P27694 616 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 WDR78Q5VTH9 848 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 SASS6Q6UVJ0 657 aa17■□□□□ 0.31
COL4A5-203ENST00000470339 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
COL4A5-203ENST00000470339 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms