RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ALS2Q96Q42 1657 aa6.95□□□□□ -1.3
VPS8-219ENST00000469479 IFT172Q9UG01 1749 aa6.95□□□□□ -1.3
VPS8-219ENST00000469479 AATKQ6ZMQ8 1374 aa6.95□□□□□ -1.3
VPS8-219ENST00000469479 KIAA0232Q92628 1395 aa6.95□□□□□ -1.3
VPS8-219ENST00000469479 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
VPS8-219ENST00000469479 BCL9O00512 1426 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 PIK3C2GO75747 1445 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 TRPM3Q9HCF6 1732 aaPredicted RBP6.94□□□□□ -1.3
VPS8-219ENST00000469479 ZNF205O95201 554 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 TNFRSF1AP19438 455 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 VWA3BQ502W6 1294 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
VPS8-219ENST00000469479 FNIP1Q8TF40 1166 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 GMIPQ9P107 970 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 IMPACTQ9P2X3 320 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 CPDO75976 1380 aa6.94□□□□□ -1.3
VPS8-219ENST00000469479 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 A0A1W2PQC6 194 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
VPS8-219ENST00000469479 CCNFP41002 786 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SLC15A2Q16348 729 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SLC16A11Q8NCK7 471 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
VPS8-219ENST00000469479 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 ARID3AQ99856 593 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 RSRP1Q9BUV0 290 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SMPD4Q9NXE4 827 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 USP35Q9P2H5 1018 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 PMF1-BGLAPU3KQ54 211 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 ADGRF5Q8IZF2 1346 aa6.93□□□□□ -1.3
VPS8-219ENST00000469479 SH3D21A4FU49 640 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 CLEC3AO75596 197 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 FSHBP01225 129 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 CYBBP04839 570 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 POLD1P28340 1107 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 ADAM17P78536 824 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 FOXO4P98177 505 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 PSMD2Q13200 908 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
VPS8-219ENST00000469479 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 CDCP2Q5VXM1 449 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 JMJD8Q96S16 334 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 POGKQ9P215 609 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
VPS8-219ENST00000469479 PARP4Q9UKK3 1724 aaKnown RBP6.92□□□□□ -1.3
VPS8-219ENST00000469479 TULP4Q9NRJ4 1543 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 CRYBG1Q9Y4K1 1723 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 F6X3S4 739 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 ITGB3P05106 788 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 VAV1P15498 845 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 DAB2P98082 770 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 DDB1Q16531 1140 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 TXNRD1Q16881 649 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 HLA-DQA1Q5Y7H0 255 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 GOLM1Q8NBJ4 401 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 PRAM1Q96QH2 718 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 RNF38Q9H0F5 515 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 CRB1P82279 1406 aa6.91□□□□□ -1.3
VPS8-219ENST00000469479 A0A1B0GTL3 188 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 SRGAP3O43295 1099 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 ATE1O95260 518 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 FBLN1P23142 703 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 HMGA2P52926 109 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 HTRA3P83110 453 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 MVKQ03426 396 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 CHRNA2Q15822 529 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.3
VPS8-219ENST00000469479 ADGRG2Q8IZP9 1017 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 TMEM52Q8NDY8 209 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 C14orf93Q9H972 538 aaKnown RBP6.9□□□□□ -1.3
VPS8-219ENST00000469479 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 MINPP1Q9UNW1 487 aa6.9□□□□□ -1.3
VPS8-219ENST00000469479 GOLGB1Q14789 3259 aaKnown RBP6.89□□□□□ -1.31
VPS8-219ENST00000469479 A0A1W2PQJ5 194 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 NOBOXO60393 691 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
VPS8-219ENST00000469479 ZC3H6P61129 1189 aaKnown RBP6.89□□□□□ -1.31
VPS8-219ENST00000469479 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
VPS8-219ENST00000469479 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
VPS8-219ENST00000469479 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 PCDHB12Q9Y5F1 795 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 SPATA31E1Q6ZUB1 1445 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 SHANK3Q9BYB0 1731 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 PEAK1Q9H792 1746 aa6.89□□□□□ -1.31
VPS8-219ENST00000469479 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
VPS8-219ENST00000469479 COL5A2P05997 1499 aaPredicted RBP6.88□□□□□ -1.31
VPS8-219ENST00000469479 ATP10DQ9P241 1426 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 BRD4O60885 1362 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms