RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 DGKDQ16760 1214 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 GNPTABQ3T906 1256 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 KAT2BQ92831 832 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 PHKBQ93100 1093 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SEZ6LQ9BYH1 1024 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 AGXT2Q9BYV1 514 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 HIPK3Q9H422 1215 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 NCOA5Q9HCD5 579 aaKnown RBP13.26□□□□□ -0.29
CDHR3-205ENST00000468143 TMEM260Q9NX78 707 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 TELO2Q9Y4R8 837 aa13.26□□□□□ -0.29
CDHR3-205ENST00000468143 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 TGFB3P10600 412 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 ADCY7P51828 1080 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 RCAN1P53805 252 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 CYFIP1Q7L576 1253 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 NLRX1Q86UT6 975 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 FBXL16Q8N461 479 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
CDHR3-205ENST00000468143 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
CDHR3-205ENST00000468143 RIC8AQ9NPQ8 531 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 BARHL2Q9NY43 387 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 LTBP2Q14767 1821 aa13.25□□□□□ -0.29
CDHR3-205ENST00000468143 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 FIBPO43427 364 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 ATP9AO75110 1047 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 STAM2O75886 525 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 ITGB5P18084 799 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 ICAM3P32942 547 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 PSEN2P49810 448 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 SP4Q02446 784 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 STK3Q13188 491 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 PPIGQ13427 754 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 MFSD10Q14728 455 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 PKN1Q16512 942 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 Q7L0L9 218 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 SCLYQ96I15 445 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 NOC4LQ9BVI4 516 aaKnown RBP13.24□□□□□ -0.29
CDHR3-205ENST00000468143 SLC26A6Q9BXS9 759 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 TM6SF1Q9BZW5 370 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 NOD1Q9Y239 953 aa13.24□□□□□ -0.29
CDHR3-205ENST00000468143 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
CDHR3-205ENST00000468143 SEC24BO95487 1268 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 SCG2P13521 617 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 EVCP57679 992 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 NEDD9Q14511 834 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 NTRK3Q16288 839 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 PTGISQ16647 500 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 KIAA0753Q2KHM9 967 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 PPP1R18Q6NYC8 613 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 ZNF365Q70YC5 407 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 C7orf31Q8N865 590 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 UBIAD1Q9Y5Z9 338 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
CDHR3-205ENST00000468143 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 NOP56O00567 594 aaKnown RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 DTNBO60941 627 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 ZNF200P98182 395 aaPredicted RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 UTP14CQ5TAP6 766 aaKnown RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 DEFB123Q8N688 67 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
CDHR3-205ENST00000468143 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 GPR20Q99678 358 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 IL23AQ9NPF7 189 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
CDHR3-205ENST00000468143 HAS3O00219 553 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 F2P00734 622 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 FGBP02675 491 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
CDHR3-205ENST00000468143 IFNAR1P17181 557 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
CDHR3-205ENST00000468143 MTMR1Q13613 665 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 HIC1Q14526 733 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 DEFB128Q7Z7B8 93 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
CDHR3-205ENST00000468143 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms