RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 NEMFO60524 1076 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 AKR1A1P14550 325 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 TRIM32Q13049 653 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 CCDC144BQ3MJ40 725 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 IQSEC1Q6DN90 963 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 LENG9Q96B70 501 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 HMX1Q9NP08 348 aaPredicted RBP17.25■□□□□ 0.35
SNIP1-202ENST00000468040 KCNH7Q9NS40 1196 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 FAM184BQ9ULE4 1060 aa17.25■□□□□ 0.35
SNIP1-202ENST00000468040 SEPT4O43236 478 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 TXNP10599 105 aaKnown RBP17.24■□□□□ 0.35
SNIP1-202ENST00000468040 MCM7P33993 719 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 ADCYAP1R1P41586 468 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
SNIP1-202ENST00000468040 TRPV1Q8NER1 839 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 ARMC5Q96C12 935 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
SNIP1-202ENST00000468040 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
SNIP1-202ENST00000468040 WNT7AO00755 349 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 TBX3O15119 743 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 NKRFO15226 690 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNIP1-202ENST00000468040 SLC37A4O43826 429 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 MSCO60682 206 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 BMP15O95972 392 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 ARP10275 920 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 CNGA1P29973 690 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 TNFAIP2Q03169 654 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 ZNF174Q15697 407 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 ATL3Q6DD88 541 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 ZNF577Q9BSK1 485 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
SNIP1-202ENST00000468040 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
SNIP1-202ENST00000468040 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
SNIP1-202ENST00000468040 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 PCDHB6Q9Y5E3 794 aa17.23■□□□□ 0.35
SNIP1-202ENST00000468040 IPO5O00410 1097 aaKnown RBP17.22■□□□□ 0.35
SNIP1-202ENST00000468040 LAD1O00515 517 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 MARCH6O60337 910 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 CCND3P30281 292 aaPredicted RBP17.22■□□□□ 0.35
SNIP1-202ENST00000468040 NEDD9Q14511 834 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 NBR1Q14596 966 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 CALCRLQ16602 461 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 DUSP28Q4G0W2 176 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 MCOLN1Q9GZU1 580 aa17.22■□□□□ 0.35
SNIP1-202ENST00000468040 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 MSH4O15457 936 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 ARIH2O95376 493 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 BAG4O95429 457 aaKnown RBP17.21■□□□□ 0.35
SNIP1-202ENST00000468040 RARBP10826 455 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 KCNA2P16389 499 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 SMPD1P17405 629 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
SNIP1-202ENST00000468040 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 RIT2Q99578 217 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNIP1-202ENST00000468040 KCNMB3Q9NPA1 279 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 TBC1D22BQ9NU19 505 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
SNIP1-202ENST00000468040 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 Q9Y3F1 56 aa17.21■□□□□ 0.35
SNIP1-202ENST00000468040 NFASCO94856 1347 aa17.21■□□□□ 0.34
SNIP1-202ENST00000468040 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.2■□□□□ 0.34
SNIP1-202ENST00000468040 ATP9AO75110 1047 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 DUSP11O75319 330 aaKnown RBP17.2■□□□□ 0.34
SNIP1-202ENST00000468040 GH1P01241 217 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 PTGDRQ13258 359 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
SNIP1-202ENST00000468040 METTL7BQ6UX53 244 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 PKD2L1Q9P0L9 805 aa17.2■□□□□ 0.34
SNIP1-202ENST00000468040 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
SNIP1-202ENST00000468040 GAS7O60861 476 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 GGPS1O95749 300 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 CCL5P13501 91 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 KRT85P78386 507 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 SP2Q02086 613 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 CELF3Q5SZQ8 465 aaKnown RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 LRCH2Q5VUJ6 765 aa17.19■□□□□ 0.34
SNIP1-202ENST00000468040 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-202ENST00000468040 TLK2Q86UE8 772 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms