RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 SEPT4O43236 478 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 RXRAP19793 462 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 EDNRBP24530 442 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
C9orf135-202ENST00000466872 KRT32Q14532 448 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 SART3Q15020 963 aaKnown RBP11.22□□□□□ -0.61
C9orf135-202ENST00000466872 APOA5Q6Q788 366 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 ANKRD35Q8N283 1001 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 SRBD1Q8N5C6 995 aaKnown RBP11.22□□□□□ -0.61
C9orf135-202ENST00000466872 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 PIGSQ96S52 555 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
C9orf135-202ENST00000466872 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
C9orf135-202ENST00000466872 ABCB11O95342 1321 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 ERICH2A1L162 156 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 CAPN2P17655 700 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 RPS6KB1P23443 525 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 VARSP26640 1264 aaKnown RBP11.21□□□□□ -0.61
C9orf135-202ENST00000466872 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 EVCP57679 992 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 RPS6P62753 249 aaKnown RBP11.21□□□□□ -0.61
C9orf135-202ENST00000466872 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 C8orf34Q49A92 452 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 ARMCX2Q7L311 632 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 CATIPQ7Z7H3 387 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 RAB11FIP4Q86YS3 637 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 JAKMIP1Q96N16 626 aaKnown RBP11.21□□□□□ -0.61
C9orf135-202ENST00000466872 MAF1Q9H063 256 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
C9orf135-202ENST00000466872 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
C9orf135-202ENST00000466872 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 CTAGE5O15320 804 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 ADAMTS4O75173 837 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 DGAT1O75907 488 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 FARP2O94887 1054 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 CDC27P30260 824 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 ALDH5A1P51649 535 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 HSD17B4P51659 736 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 RCAN1P53805 252 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 NKX3-2P78367 333 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 USH1GQ495M9 461 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 FBXO11Q86XK2 927 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 TMTC2Q8N394 836 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 SYTL5Q8TDW5 730 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 LENG1Q96BZ8 264 aaPredicted RBP11.2□□□□□ -0.62
C9orf135-202ENST00000466872 TM6SF1Q9BZW5 370 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
C9orf135-202ENST00000466872 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 LOC102724159A0A0B4J2E5 919 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 LCE2BO14633 110 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
C9orf135-202ENST00000466872 PTGS1P23219 599 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 ACVR2BQ13705 512 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 PWP2Q15269 919 aaKnown RBP11.19□□□□□ -0.62
C9orf135-202ENST00000466872 TMEM63BQ5T3F8 832 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
C9orf135-202ENST00000466872 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 Q6ZNB5 142 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 Q6ZUG5 572 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
C9orf135-202ENST00000466872 FANCBQ8NB91 859 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 PAWRQ96IZ0 340 aaKnown RBP11.19□□□□□ -0.62
C9orf135-202ENST00000466872 AMNQ9BXJ7 453 aa11.19□□□□□ -0.62
C9orf135-202ENST00000466872 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CCDC69A6NI79 296 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 MSCO60682 206 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CALM1P0DP23 149 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CALM2P0DP24 149 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CALM3P0DP25 149 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 RNF207Q6ZRF8 634 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
C9orf135-202ENST00000466872 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
C9orf135-202ENST00000466872 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms