RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SALL4Q9UJQ4 1053 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 HPCAL4Q9UM19 191 aa21.45■■□□□ 1.03
LIMS2-212ENST00000466410 USP17L10C9JJH3 530 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 ADRA2BP18089 450 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 ZCWPW2Q504Y3 356 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 KCTD1Q719H9 257 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 CERS5Q8N5B7 392 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 TBC1D7Q9P0N9 293 aa21.45■■□□□ 1.02
LIMS2-212ENST00000466410 MARCH6O60337 910 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 SYF2O95926 243 aaKnown RBP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 SHMT1P34896 483 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 CCNI2Q6ZMN8 369 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 MXD3Q9BW11 206 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 PANK4Q9NVE7 773 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 PCDHA12Q9UN75 941 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 ZC3H4Q9UPT8 1303 aaKnown RBP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 CAPN2P17655 700 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-212ENST00000466410 PDXDC1Q6P996 788 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 CACNA2D4Q7Z3S7 1137 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 TRERF1Q96PN7 1200 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 PSMB7Q99436 277 aa21.44■■□□□ 1.02
LIMS2-212ENST00000466410 TRAF5O00463 557 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 ACTN2P35609 894 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 MAGEA1P43355 309 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 AARSP49588 968 aaKnown RBP eCLIP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 MRPL12P52815 198 aaKnown RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 GFPT1Q06210 699 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 ASTE1Q2TB18 679 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 FAM26FQ5R3K3 315 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 GOLGA5Q8TBA6 731 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 PSTPIP2Q9H939 334 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 FKBP3Q00688 224 aaKnown RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 EZH2Q15910 746 aaKnown RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 HGSNATQ68CP4 663 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 NFRKBQ6P4R8 1299 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 PROM2Q8N271 834 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 NLRC4Q9NPP4 1024 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 USP40Q9NVE5 1235 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 COL4A3BPQ9Y5P4 624 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 E9PMD0 336 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 MPHOSPH10O00566 681 aaKnown RBP21.43■■□□□ 1.02
LIMS2-212ENST00000466410 ZBTB5O15062 677 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 RNF40O75150 1001 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 CXCR5P32302 372 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 SCNN1DP51172 638 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 DDR1Q08345 913 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 IQCEQ6IPM2 695 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 HDAC7Q8WUI4 952 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 OSBPL9Q96SU4 736 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 FAM204AQ9H8W3 233 aa21.43■■□□□ 1.02
LIMS2-212ENST00000466410 FOXR2Q6PJQ5 311 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 CRAMP1Q96RY5 1269 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 SELENOOQ9BVL4 669 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 SMARCAL1Q9NZC9 954 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L15C9J2P7 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L13C9JLJ4 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L11C9JVI0 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L18D6R9N7 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L22D6RA61 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 PRLRP16471 622 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 SLC1A4P43007 532 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
LIMS2-212ENST00000466410 RASSF7Q02833 373 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 RAD51AP2Q09MP3 1159 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 CCDC40Q4G0X9 1142 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 USP17L6PQ6QN14 398 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 MMGT1Q8N4V1 131 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 RIN2Q8WYP3 895 aaPredicted RBP21.42■■□□□ 1.02
LIMS2-212ENST00000466410 SWAP70Q9UH65 585 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 KIAA1024Q9UPX6 916 aa21.42■■□□□ 1.02
LIMS2-212ENST00000466410 NPHP3-ACAD11A0A0J9YXS1 232 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 PJA2O43164 708 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 NCK2O43639 380 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 NOL4O94818 638 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 MRPS25P82663 173 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 GPATCH4Q5T3I0 446 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 NELFCDQ8IXH7 590 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 SPATA4Q8NEY3 305 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 LRRC1Q9BTT6 524 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 QTRT2Q9H974 415 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 KANSL2Q9H9L4 492 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 EHD2Q9NZN4 543 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 GCFC2P16383 781 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 SEPT2Q15019 361 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 TDRD12Q587J7 1177 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 HYIQ5T013 277 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 ALS2CR12Q96Q35 445 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 EDEM3Q9BZQ6 932 aa21.41■■□□□ 1.02
LIMS2-212ENST00000466410 DMGDHQ9UI17 866 aaKnown RBP21.41■■□□□ 1.02
LIMS2-212ENST00000466410 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms