RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PXMP2Q9NR77 195 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 SLC45A1Q9Y2W3 748 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 ASTN1O14525 1302 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 MYCLP12524 364 aaPredicted RBP20.94■□□□□ 0.94
CAPN3-209ENST00000466222 ITGB5P18084 799 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 PRPHP41219 470 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 SYKP43405 635 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 PGM5Q15124 567 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 LONRF3Q496Y0 759 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 ARHGEF16Q5VV41 709 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 ETNPPLQ8TBG4 499 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 PDCD2LQ9BRP1 358 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 MAP3K20Q9NYL2 800 aaKnown RBP20.94■□□□□ 0.94
CAPN3-209ENST00000466222 PARP14Q460N5 1801 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 FAM237AA0A1B0GTK4 181 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 POTEMA6NI47 508 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 MSH4O15457 936 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
CAPN3-209ENST00000466222 PGK2P07205 417 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 Q4G0T1 1027 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 TEX2Q8IWB9 1127 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 BPIFA3Q9BQP9 254 aa20.94■□□□□ 0.94
CAPN3-209ENST00000466222 MANSC4A6NHS7 340 aaPredicted RBP20.93■□□□□ 0.94
CAPN3-209ENST00000466222 ARP10275 920 aa20.93■□□□□ 0.94
CAPN3-209ENST00000466222 ORC2Q13416 577 aaPredicted RBP20.93■□□□□ 0.94
CAPN3-209ENST00000466222 CEP55Q53EZ4 464 aa20.93■□□□□ 0.94
CAPN3-209ENST00000466222 MOXD1Q6UVY6 613 aa20.93■□□□□ 0.94
CAPN3-209ENST00000466222 GPRC5AQ8NFJ5 357 aa20.93■□□□□ 0.94
CAPN3-209ENST00000466222 WDR11Q9BZH6 1224 aa20.93■□□□□ 0.94
CAPN3-209ENST00000466222 MARCH6O60337 910 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 LONP1P36776 959 aaKnown RBP20.92■□□□□ 0.94
CAPN3-209ENST00000466222 DHX8Q14562 1220 aaKnown RBP20.92■□□□□ 0.94
CAPN3-209ENST00000466222 PLIN2Q99541 437 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 CPA4Q9UI42 421 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 KARSQ15046 597 aaKnown RBP20.92■□□□□ 0.94
CAPN3-209ENST00000466222 ZRSR1Q15695 479 aaKnown RBP20.92■□□□□ 0.94
CAPN3-209ENST00000466222 IGSF22Q8N9C0 903 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 PARK7Q99497 189 aaKnown RBP20.92■□□□□ 0.94
CAPN3-209ENST00000466222 EHMT1Q9H9B1 1298 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 PKD2L1Q9P0L9 805 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 PCDHA12Q9UN75 941 aa20.92■□□□□ 0.94
CAPN3-209ENST00000466222 FRMPD4Q14CM0 1322 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 MEIS1O00470 390 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 FOXN1O15353 648 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 SLC25A27O95847 323 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 PCNX4Q63HM2 1172 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 IFNL1Q8IU54 200 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 DHX40Q8IX18 779 aaKnown RBP20.91■□□□□ 0.94
CAPN3-209ENST00000466222 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 CCDC102AQ96A19 550 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 NAP1L4Q99733 375 aaKnown RBP20.91■□□□□ 0.94
CAPN3-209ENST00000466222 NUDT12Q9BQG2 462 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 MXRA8Q9BRK3 442 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 FBXO40Q9UH90 709 aa20.91■□□□□ 0.94
CAPN3-209ENST00000466222 NR3C2P08235 984 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 HTRA3P83110 453 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 LRRC15Q8TF66 581 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 DHX58Q96C10 678 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 SDF4Q9BRK5 362 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 MMTAG2Q9BU76 263 aaKnown RBP20.9■□□□□ 0.94
CAPN3-209ENST00000466222 SERTAD1Q9UHV2 236 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 NRBP1Q9UHY1 535 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 COL11A1P12107 1806 aaPredicted RBP20.9■□□□□ 0.94
CAPN3-209ENST00000466222 A0A087WWV3 80 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 SOWAHBA6NEL2 793 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 AOC2O75106 756 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 FXR2P51116 673 aaKnown RBP eCLIP20.9■□□□□ 0.94
CAPN3-209ENST00000466222 GRAMD1CQ8IYS0 662 aa20.9■□□□□ 0.94
CAPN3-209ENST00000466222 NSUN6Q8TEA1 469 aaKnown RBP20.9■□□□□ 0.94
CAPN3-209ENST00000466222 VSIG10LQ86VR7 867 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 TIGD1Q96MW7 591 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 KCNH7Q9NS40 1196 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 KIAA1468Q9P260 1216 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 LRWD1Q9UFC0 647 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
CAPN3-209ENST00000466222 A0A0G2JMZ2 1700 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 POTEB2H3BUK9 544 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 GCLCP48506 637 aaPredicted RBP20.88■□□□□ 0.93
CAPN3-209ENST00000466222 GSDMDP57764 484 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 SPIRE1Q08AE8 756 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 SYCP1Q15431 976 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 TAF1CQ15572 869 aaPredicted RBP20.88■□□□□ 0.93
CAPN3-209ENST00000466222 LRRC8AQ8IWT6 810 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 CACTINQ8WUQ7 758 aaKnown RBP20.88■□□□□ 0.93
CAPN3-209ENST00000466222 MMP19Q99542 508 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 IMPACTQ9P2X3 320 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 MORF4L1Q9UBU8 362 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 PAXBP1Q9Y5B6 917 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 CENPFP49454 3210 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 SMTNL1A8MU46 457 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 CTIFO43310 598 aaKnown RBP20.88■□□□□ 0.93
CAPN3-209ENST00000466222 RGS20O76081 388 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 UBA7P41226 1012 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 TPM4P67936 248 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 LRMPQ12912 555 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 KRBA2Q6ZNG9 492 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 CNNM3Q8NE01 707 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 STAMQ92783 540 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 MROH8Q9H579 483 aa20.88■□□□□ 0.93
CAPN3-209ENST00000466222 CEP350Q5VT06 3117 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms