RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
VCP-204ENST00000466100 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 HAS1Q92839 578 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
VCP-204ENST00000466100 KCNH7Q9NS40 1196 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
VCP-204ENST00000466100 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 TRIM17Q9Y577 477 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
VCP-204ENST00000466100 TBX3O15119 743 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 FIBPO43427 364 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 ARIH2O95376 493 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
VCP-204ENST00000466100 BMP15O95972 392 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 ZNF865P0CJ78 1059 aaPredicted RBP12.63□□□□□ -0.39
VCP-204ENST00000466100 CYBAP13498 195 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 KCNA2P16389 499 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 CYP2C19P33261 490 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 ZNF76P36508 570 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 LBX1P52954 281 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 KRT85P78386 507 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 MTMR1Q13613 665 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 CCDC62Q6P9F0 684 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
VCP-204ENST00000466100 TRPV1Q8NER1 839 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
VCP-204ENST00000466100 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 ABHD16BQ9H3Z7 469 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
VCP-204ENST00000466100 PDGFCQ9NRA1 345 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 PTCH2Q9Y6C5 1203 aa12.63□□□□□ -0.39
VCP-204ENST00000466100 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
VCP-204ENST00000466100 LAD1O00515 517 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 MAFGO15525 162 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 DHX15O43143 795 aaKnown RBP12.62□□□□□ -0.39
VCP-204ENST00000466100 ADCY3O60266 1144 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 ATP9AO75110 1047 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 HMGCRP04035 888 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 OR52Z1P0C646 297 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 ELNP15502 786 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 PRPHP41219 470 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 SP2Q02086 613 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
VCP-204ENST00000466100 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 TRIM32Q13049 653 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
VCP-204ENST00000466100 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 IL17AQ16552 155 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 CALCRLQ16602 461 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 NLRX1Q86UT6 975 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 GJA10Q969M2 543 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 FBXO2Q9UK22 296 aaPredicted RBP12.62□□□□□ -0.39
VCP-204ENST00000466100 VAV3Q9UKW4 847 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 CFAP45Q9UL16 551 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
VCP-204ENST00000466100 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 SPTLC2O15270 562 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 ADCY6O43306 1168 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 PSMD10O75832 226 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 TGFB3P10600 412 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 UBA1P22314 1058 aaKnown RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 PRAMEF19Q5SWL8 479 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 ARL6IP4Q66PJ3 421 aaKnown RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 SEPT14Q6ZU15 432 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 CTU1Q7Z7A3 348 aaKnown RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 BCAS3Q9H6U6 928 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 DDX41Q9UJV9 622 aaKnown RBP12.61□□□□□ -0.39
VCP-204ENST00000466100 NFASCO94856 1347 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 ELP1O95163 1332 aa12.61□□□□□ -0.39
VCP-204ENST00000466100 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 PPP6R2O75170 966 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 MARCKSP29966 332 aaPredicted RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 ADCYAP1R1P41586 468 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 GRIN1Q05586 938 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 CACNB2Q08289 660 aaPredicted RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 STK38Q15208 465 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 CCDC144BQ3MJ40 725 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms