RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MCF2L2Q86YR7 1114 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 USP38Q8NB14 1042 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 CLEC4DQ8WXI8 215 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 PIGSQ96S52 555 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 SLC26A6Q9BXS9 759 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
CPSF4-209ENST00000465132 MTIF3Q9H2K0 278 aaKnown RBP20.03■□□□□ 0.8
CPSF4-209ENST00000465132 CNTNAP5Q8WYK1 1306 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.8
CPSF4-209ENST00000465132 CCL23P55773 120 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 RAB30Q15771 203 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 NTRK3Q16288 839 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 PPP1R18Q6NYC8 613 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 SLC30A10Q6XR72 485 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 WNT8AQ9H1J5 351 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 MAP3K20Q9NYL2 800 aaKnown RBP20.02■□□□□ 0.8
CPSF4-209ENST00000465132 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.8
CPSF4-209ENST00000465132 CYTH3O43739 400 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 SCG2P13521 617 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 CALML3P27482 149 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 PFKFB3Q16875 520 aaPredicted RBP20.01■□□□□ 0.79
CPSF4-209ENST00000465132 RNF207Q6ZRF8 634 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 OTOP2Q7RTS6 562 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 NECAB1Q8N987 351 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 FAM184AQ8NB25 1140 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 INTS4Q96HW7 963 aaKnown RBP20.01■□□□□ 0.79
CPSF4-209ENST00000465132 GAS2L1Q99501 681 aaPredicted RBP20.01■□□□□ 0.79
CPSF4-209ENST00000465132 PRDM12Q9H4Q4 367 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 POLR3EQ9NVU0 708 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 DAXXQ9UER7 740 aaPredicted RBP20.01■□□□□ 0.79
CPSF4-209ENST00000465132 MSRAQ9UJ68 235 aa20.01■□□□□ 0.79
CPSF4-209ENST00000465132 BAZ2BQ9UIF8 2168 aaKnown RBP20.01■□□□□ 0.79
CPSF4-209ENST00000465132 PDIA4P13667 645 aaKnown RBP20■□□□□ 0.79
CPSF4-209ENST00000465132 CPT1AP50416 773 aa20■□□□□ 0.79
CPSF4-209ENST00000465132 PURAQ00577 322 aaKnown RBP20■□□□□ 0.79
CPSF4-209ENST00000465132 FUT2Q10981 343 aa20■□□□□ 0.79
CPSF4-209ENST00000465132 TRIM29Q14134 588 aa20■□□□□ 0.79
CPSF4-209ENST00000465132 CMTR1Q8N1G2 835 aaKnown RBP20■□□□□ 0.79
CPSF4-209ENST00000465132 SYMPKQ92797 1274 aaKnown RBP20■□□□□ 0.79
CPSF4-209ENST00000465132 CPVLQ9H3G5 476 aa20■□□□□ 0.79
CPSF4-209ENST00000465132 VCANP13611 3396 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 LARGE1O95461 756 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 RPS6P62753 249 aaKnown RBP19.99■□□□□ 0.79
CPSF4-209ENST00000465132 PDE4DQ08499 809 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 MCTP2Q6DN12 878 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 HEATR3Q7Z4Q2 680 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 RPUSD2Q8IZ73 545 aaKnown RBP19.99■□□□□ 0.79
CPSF4-209ENST00000465132 RGS22Q8NE09 1264 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 OR6J1Q8NGC5 347 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 PHKBQ93100 1093 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 VWCEQ96DN2 955 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 TRMT13Q9NUP7 481 aaKnown RBP19.99■□□□□ 0.79
CPSF4-209ENST00000465132 ORC3Q9UBD5 711 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-209ENST00000465132 SMC3Q9UQE7 1217 aa19.99■□□□□ 0.79
CPSF4-209ENST00000465132 PRUNE2Q8WUY3 3088 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 MYL3P08590 195 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 SUPT20HL2P0C7V6 817 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 EDNRBP24530 442 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 GNA11P29992 359 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 CUL4AQ13619 759 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 USH1GQ495M9 461 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 GALNT17Q6IS24 598 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 NSUN7Q8NE18 718 aaKnown RBP19.98■□□□□ 0.79
CPSF4-209ENST00000465132 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 PIBF1Q8WXW3 757 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 CUL5Q93034 780 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 SCLYQ96I15 445 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 MPHOSPH6Q99547 160 aaKnown RBP19.98■□□□□ 0.79
CPSF4-209ENST00000465132 MTG1Q9BT17 334 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-209ENST00000465132 NKX2-4Q9H2Z4 354 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 BARHL2Q9NY43 387 aa19.98■□□□□ 0.79
CPSF4-209ENST00000465132 YBX2Q9Y2T7 364 aaKnown RBP19.98■□□□□ 0.79
CPSF4-209ENST00000465132 SPTBN5Q9NRC6 3674 aaKnown RBP19.97■□□□□ 0.79
CPSF4-209ENST00000465132 NKRFO15226 690 aaKnown RBP eCLIP19.97■□□□□ 0.79
CPSF4-209ENST00000465132 CD2BP2O95400 341 aaKnown RBP19.97■□□□□ 0.79
CPSF4-209ENST00000465132 CYP2C9P11712 490 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 PDCP20941 246 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
CPSF4-209ENST00000465132 NAPAP54920 295 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 ADGRE1Q14246 886 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 TJAP1Q5JTD0 557 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 DNERQ8NFT8 737 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 SCFD2Q8WU76 684 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 SLC28A3Q9HAS3 691 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 C6orf50Q9HD87 102 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 PRDM6Q9NQX0 595 aa19.97■□□□□ 0.79
CPSF4-209ENST00000465132 B4DLN1 442 aa19.96■□□□□ 0.79
CPSF4-209ENST00000465132 BRDTQ58F21 947 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-209ENST00000465132 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
CPSF4-209ENST00000465132 PPM1EQ8WY54 764 aa19.96■□□□□ 0.79
CPSF4-209ENST00000465132 BRMS1Q9HCU9 246 aa19.96■□□□□ 0.79
CPSF4-209ENST00000465132 SLC4A7Q9Y6M7 1214 aa19.96■□□□□ 0.79
CPSF4-209ENST00000465132 A6NJR5 290 aa19.95■□□□□ 0.78
CPSF4-209ENST00000465132 KPNA6O60684 536 aa19.95■□□□□ 0.78
CPSF4-209ENST00000465132 RABGGTBP53611 331 aa19.95■□□□□ 0.78
CPSF4-209ENST00000465132 NBPF20Q3BBV1 942 aa19.95■□□□□ 0.78
CPSF4-209ENST00000465132 COPS5Q92905 334 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms