RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 SP4Q02446 784 aa14□□□□□ -0.17
XRN1-204ENST00000465074 CELF3Q5SZQ8 465 aaKnown RBP14□□□□□ -0.17
XRN1-204ENST00000465074 MFSD5Q6N075 450 aa14□□□□□ -0.17
XRN1-204ENST00000465074 TMEM199Q8N511 208 aa14□□□□□ -0.17
XRN1-204ENST00000465074 PGBD1Q96JS3 809 aa14□□□□□ -0.17
XRN1-204ENST00000465074 RNPC3Q96LT9 517 aaKnown RBP14□□□□□ -0.17
XRN1-204ENST00000465074 UPF3BQ9BZI7 483 aaKnown RBP14□□□□□ -0.17
XRN1-204ENST00000465074 BCAS3Q9H6U6 928 aa14□□□□□ -0.17
XRN1-204ENST00000465074 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
XRN1-204ENST00000465074 PKD2L1Q9P0L9 805 aa14□□□□□ -0.17
XRN1-204ENST00000465074 UMODL1Q5DID0 1318 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 SMCO2A6NFE2 343 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 PIK3CDO00329 1044 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 NOP56O00567 594 aaKnown RBP13.99□□□□□ -0.17
XRN1-204ENST00000465074 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 UBA1P22314 1058 aaKnown RBP13.99□□□□□ -0.17
XRN1-204ENST00000465074 ADCY7P51828 1080 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 PPIGQ13427 754 aaKnown RBP eCLIP13.99□□□□□ -0.17
XRN1-204ENST00000465074 LRIT3Q3SXY7 679 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 MYSM1Q5VVJ2 828 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 PCNX4Q63HM2 1172 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 CYFIP1Q7L576 1253 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 NLRX1Q86UT6 975 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 PHKBQ93100 1093 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 SEZ6LQ9BYH1 1024 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 EHMT1Q9H9B1 1298 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
XRN1-204ENST00000465074 PCDHA6Q9UN73 950 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 PCDHA8Q9Y5H6 950 aa13.99□□□□□ -0.17
XRN1-204ENST00000465074 STXBP3O00186 592 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 FIBPO43427 364 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 STAM2O75886 525 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 TGFB3P10600 412 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 PSEN2P49810 448 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 FUT2Q10981 343 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 STK3Q13188 491 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 HSDL1Q3SXM5 330 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 Q7L0L9 218 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 C7orf31Q8N865 590 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 PPTC7Q8NI37 304 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 TMEM260Q9NX78 707 aa13.98□□□□□ -0.17
XRN1-204ENST00000465074 FRMPD4Q14CM0 1322 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 SCN10AQ9Y5Y9 1956 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
XRN1-204ENST00000465074 MFSD10Q14728 455 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 PTGISQ16647 500 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 KIAA0753Q2KHM9 967 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 UTP14CQ5TAP6 766 aaKnown RBP13.97□□□□□ -0.17
XRN1-204ENST00000465074 TYW1BQ6NUM6 668 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 NFRKBQ6P4R8 1299 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 DEFB123Q8N688 67 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 KAT2BQ92831 832 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 EMID1Q96A84 441 aaPredicted RBP13.97□□□□□ -0.17
XRN1-204ENST00000465074 SCLYQ96I15 445 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 INPP4AQ96PE3 977 aaPredicted RBP13.97□□□□□ -0.17
XRN1-204ENST00000465074 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.17
XRN1-204ENST00000465074 NOC4LQ9BVI4 516 aaKnown RBP13.97□□□□□ -0.17
XRN1-204ENST00000465074 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
XRN1-204ENST00000465074 EPB41L2O43491 1005 aaKnown RBP13.96□□□□□ -0.17
XRN1-204ENST00000465074 PPFIA4O75335 1185 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 SCG2P13521 617 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 ZNF76P36508 570 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 RCAN1P53805 252 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.17
XRN1-204ENST00000465074 NEDD9Q14511 834 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 PFKFB3Q16875 520 aaPredicted RBP13.96□□□□□ -0.17
XRN1-204ENST00000465074 JAKMIP3Q5VZ66 844 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
XRN1-204ENST00000465074 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 RETREG2Q8NC44 543 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 KATNAL1Q9BW62 490 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 HDAC6Q9UBN7 1215 aa13.96□□□□□ -0.17
XRN1-204ENST00000465074 CPLX1O14810 134 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 ICAM3P32942 547 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
XRN1-204ENST00000465074 MTMR1Q13613 665 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 OTOP2Q7RTS6 562 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 AGXT2Q9BYV1 514 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 TM6SF1Q9BZW5 370 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 WNT8AQ9H1J5 351 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
XRN1-204ENST00000465074 LAMA2P24043 3122 aaKnown RBP13.95□□□□□ -0.18
XRN1-204ENST00000465074 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 SZT2Q5T011 3432 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms