RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 KDM4AO75164 1064 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 CFBP00751 764 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 AMHP03971 560 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 NR3C2P08235 984 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 KCNA5P22460 613 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 MBTPS1Q14703 1052 aa17.04■□□□□ 0.32
MCF2L-220ENST00000464800 RALGAPA2Q2PPJ7 1873 aa17.03■□□□□ 0.32
MCF2L-220ENST00000464800 ZNF213O14771 459 aa17.03■□□□□ 0.32
MCF2L-220ENST00000464800 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
MCF2L-220ENST00000464800 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-220ENST00000464800 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-220ENST00000464800 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
MCF2L-220ENST00000464800 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
MCF2L-220ENST00000464800 ZSCAN10Q96SZ4 725 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-220ENST00000464800 C17orf80Q9BSJ5 609 aa17.03■□□□□ 0.32
MCF2L-220ENST00000464800 COL4A6Q14031 1691 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-220ENST00000464800 THPOP40225 353 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 HSD17B4P51659 736 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
MCF2L-220ENST00000464800 SERINC5Q86VE9 423 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 GJD3Q8N144 294 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-220ENST00000464800 ANKS1AQ92625 1134 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 CTNNA3Q9UI47 895 aa17.02■□□□□ 0.32
MCF2L-220ENST00000464800 RSPH10B2B2RC85 870 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 B4E1Z4 1266 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 SORBS3O60504 671 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 PPFIA4O75335 1185 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 RSPH10BP0C881 870 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 MYCLP12524 364 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 PTPROQ16827 1216 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 TIGD5Q53EQ6 642 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
MCF2L-220ENST00000464800 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 AMNQ9BXJ7 453 aa17.01■□□□□ 0.31
MCF2L-220ENST00000464800 PRR33A8MZF0 331 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 OPLAHO14841 1288 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 GGPS1O95749 300 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 IL9P15248 144 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 SDSP20132 328 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 GHRHRQ02643 423 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 HIC1Q14526 733 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 PUS10Q3MIT2 529 aaKnown RBP17■□□□□ 0.31
MCF2L-220ENST00000464800 HSDL1Q3SXM5 330 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 DBF4BQ8NFT6 615 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 SAMD11Q96NU1 681 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 MUC6Q6W4X9 2439 aa17■□□□□ 0.31
MCF2L-220ENST00000464800 C17orf102A2RUQ5 167 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 RGS20O76081 388 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 UBA1P22314 1058 aaKnown RBP16.99■□□□□ 0.31
MCF2L-220ENST00000464800 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-220ENST00000464800 EPC2Q52LR7 807 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 PLEKHG4Q58EX7 1191 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 ATP6V0A1Q93050 837 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 YME1L1Q96TA2 773 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 MAP3K20Q9NYL2 800 aaKnown RBP16.99■□□□□ 0.31
MCF2L-220ENST00000464800 ATG2AQ2TAZ0 1938 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 DOCK5Q9H7D0 1870 aa16.99■□□□□ 0.31
MCF2L-220ENST00000464800 GRXCR2A6NFK2 248 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 ALADP13716 330 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 PGM5Q15124 567 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 SEPT8Q92599 483 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 C16orf70Q9BSU1 422 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 MLXIPQ9HAP2 919 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 ZSWIM5Q9P217 1185 aa16.98■□□□□ 0.31
MCF2L-220ENST00000464800 ZBTB5O15062 677 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 PPP1R11O60927 126 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-220ENST00000464800 CAND2O75155 1236 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 SMIM10L2AP0DMW4 78 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 SMIM10L2BP0DMW5 78 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 TGFB3P10600 412 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 CCND2P30279 289 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 HOXA13P31271 388 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-220ENST00000464800 HOXC8P31273 242 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 IMMTQ16891 758 aaKnown RBP16.97■□□□□ 0.31
MCF2L-220ENST00000464800 IFIT1BQ5T764 474 aaKnown RBP16.97■□□□□ 0.31
MCF2L-220ENST00000464800 CWC27Q6UX04 472 aaKnown RBP16.97■□□□□ 0.31
MCF2L-220ENST00000464800 VSIG10LQ86VR7 867 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 SAMD3Q8N6K7 520 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 BANK1Q8NDB2 785 aa16.97■□□□□ 0.31
MCF2L-220ENST00000464800 IL31RAQ8NI17 732 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms