RNA–Protein interactions for RNA: ENST00000464788.5

GNAS-223, Transcript of GNAS complex locus, human

TSL 2

Gene GNAS, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-223	ENST00000464788	SCFD2	Q8WU76	684 aa		18.21	■□□□□ 0.51
GNAS-223	ENST00000464788	ZNF396	Q96N95	335 aa	Predicted RBP	18.21	■□□□□ 0.51
GNAS-223	ENST00000464788	MRVI1	Q9Y6F6	885 aa		18.21	■□□□□ 0.51
GNAS-223	ENST00000464788	DOCK5	Q9H7D0	1870 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	ICAM3	P32942	547 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	SLC9C1	Q4G0N8	1177 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	PRAMEF19	Q5SWL8	479 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	TAPT1	Q6NXT6	567 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	KCNV1	Q6PIU1	500 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	KCNH7	Q9NS40	1196 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	CEP131	Q9UPN4	1083 aa		18.2	■□□□□ 0.5
GNAS-223	ENST00000464788	FRMPD3	Q5JV73	1810 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	RBM47	A0AV96	593 aa	Known RBP	18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	SPATA31C2	B4DYI2	1134 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	MAFG	O15525	162 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	AR	P10275	920 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	CACNB2	Q08289	660 aa	Predicted RBP	18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	SEMA3F	Q13275	785 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	TTLL4	Q14679	1199 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	CALCRL	Q16602	461 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	CCDC144B	Q3MJ40	725 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	MAP3K21	Q5TCX8	1036 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	ANO1	Q5XXA6	986 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	ATL3	Q6DD88	541 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	TRPV1	Q8NER1	839 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	SH3TC2	Q8TF17	1288 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	USP28	Q96RU2	1077 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.19	■□□□□ 0.5	9e-7	■■■□□ 18.4
GNAS-223	ENST00000464788	AGO4	Q9HCK5	861 aa	Known RBP	18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	PDGFC	Q9NRA1	345 aa		18.19	■□□□□ 0.5
GNAS-223	ENST00000464788	MSH4	O15457	936 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	BMP15	O95972	392 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	TGFB3	P10600	412 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	ADCYAP1R1	P41586	468 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	DNM1	Q05193	864 aa	Known RBP	18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	SF3A1	Q15459	793 aa	Known RBP	18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	ETNPPL	Q8TBG4	499 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	ZNF577	Q9BSK1	485 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	KCNMB3	Q9NPA1	279 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	POLR3E	Q9NVU0	708 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	PKD2L1	Q9P0L9	805 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	CLIC4	Q9Y696	253 aa		18.18	■□□□□ 0.5
GNAS-223	ENST00000464788	IPO5	O00410	1097 aa	Known RBP	18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	LAD1	O00515	517 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	TBX3	O15119	743 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	MARCH6	O60337	910 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	ARIH2	O95376	493 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	OR52Z1	P0C646	297 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	TXN	P10599	105 aa	Known RBP	18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	AKR1A1	P14550	325 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	NCL	P19338	710 aa	Known RBP	18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	UBA1	P22314	1058 aa	Known RBP	18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	KRT85	P78386	507 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	CEBPZ	Q03701	1054 aa	Known RBP	18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	PTGDR	Q13258	359 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	IQSEC1	Q6DN90	963 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	CCDC62	Q6P9F0	684 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	TMEM60	Q9H2L4	133 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	CFAP45	Q9UL16	551 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	FAM184B	Q9ULE4	1060 aa		18.17	■□□□□ 0.5
GNAS-223	ENST00000464788	TCHH	Q07283	1943 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	SEPT4	O43236	478 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	BAG4	O95429	457 aa	Known RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	KCNA2	P16389	499 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	CNGA1	P29973	690 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	CCND3	P30281	292 aa	Predicted RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	NASP	P49321	788 aa	Predicted RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	ATP2C1	P98194	919 aa	Predicted RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	TNFAIP2	Q03169	654 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	LY6K	Q17RY6	165 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	SLFN12	Q8IYM2	578 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	SLC5A5	Q92911	643 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	TNPO1	Q92973	898 aa	Known RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	FAM20A	Q96MK3	541 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	MTMR9	Q96QG7	549 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	UIMC1	Q96RL1	719 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	SENP7	Q9BQF6	1050 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	SDF4	Q9BRK5	362 aa		18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	TFIP11	Q9UBB9	837 aa	Known RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	DDX41	Q9UJV9	622 aa	Known RBP	18.16	■□□□□ 0.5
GNAS-223	ENST00000464788	NKRF	O15226	690 aa	Known RBP eCLIP	18.15	■□□□□ 0.5	2e-10	■■□□□ 12.2
GNAS-223	ENST00000464788	GAS7	O60861	476 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	ATP9A	O75110	1047 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	YEATS4	O95619	227 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	SMPD1	P17405	629 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	ITGB3BP	Q13352	177 aa	Predicted RBP	18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	NEDD9	Q14511	834 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	STK38	Q15208	465 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	PTPA	Q15257	358 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	DUSP28	Q4G0W2	176 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	LRCH2	Q5VUJ6	765 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	C4orf32	Q8N8J7	132 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	HAS1	Q92839	578 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	GJA10	Q969M2	543 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	CHAMP1	Q96JM3	812 aa		18.15	■□□□□ 0.5
GNAS-223	ENST00000464788	RIT2	Q99578	217 aa		18.15	■□□□□ 0.5

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