RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 GTF2IRD1Q9UHL9 959 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 PNMA6FA0A0J9YX94 578 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 HAS3O00219 553 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 RFXAPO00287 272 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 GGPS1O95749 300 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 F2P00734 622 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 CA3P07451 260 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 KIAA0753Q2KHM9 967 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 HSDL1Q3SXM5 330 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
ALMS1-202ENST00000464408 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 TMCO2Q7Z6W1 182 aaPredicted RBP16.81■□□□□ 0.28
ALMS1-202ENST00000464408 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 CERS4Q9HA82 394 aa16.81■□□□□ 0.28
ALMS1-202ENST00000464408 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 ACTN1P12814 892 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 HOXD8P13378 290 aaPredicted RBP16.8■□□□□ 0.28
ALMS1-202ENST00000464408 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 ZNF654Q8IZM8 581 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 LSG1Q9H089 658 aaKnown RBP16.8■□□□□ 0.28
ALMS1-202ENST00000464408 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
ALMS1-202ENST00000464408 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 XIRP2A4UGR9 3374 aa16.8■□□□□ 0.28
ALMS1-202ENST00000464408 COL4A4P53420 1690 aaPredicted RBP16.79■□□□□ 0.28
ALMS1-202ENST00000464408 NBNO60934 754 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 PLEKHA8P1O95397 391 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 CKBP12277 381 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 SELPP16109 830 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 RXRAP19793 462 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 CCND2P30279 289 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 MRPS9P82933 396 aaKnown RBP16.79■□□□□ 0.28
ALMS1-202ENST00000464408 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
ALMS1-202ENST00000464408 TRIM71Q2Q1W2 868 aaKnown RBP16.79■□□□□ 0.28
ALMS1-202ENST00000464408 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 LRRC8DQ7L1W4 858 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 RAB11FIP4Q86YS3 637 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
ALMS1-202ENST00000464408 SLC9A7Q96T83 725 aa16.79■□□□□ 0.28
ALMS1-202ENST00000464408 FRMPD4Q14CM0 1322 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 PRC1O43663 620 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 RBL2Q08999 1139 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 SEMA3FQ13275 785 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 KRT40Q6A162 431 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 USP17L6PQ6QN14 398 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 HERC6Q8IVU3 1022 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 C16orf70Q9BSU1 422 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 RTEL1Q9NZ71 1219 aa16.78■□□□□ 0.28
ALMS1-202ENST00000464408 NCOR1O75376 2440 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 TCF20Q9UGU0 1960 aaKnown RBP16.77■□□□□ 0.28
ALMS1-202ENST00000464408 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
ALMS1-202ENST00000464408 SLC27A2O14975 620 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 PPFIA4O75335 1185 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
ALMS1-202ENST00000464408 DEFB103AP81534 67 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 TAP1Q03518 808 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 ZNF618Q5T7W0 954 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 KATNAL1Q9BW62 490 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.28
ALMS1-202ENST00000464408 MICAL3Q7RTP6 2002 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 LCHNA4D1U4 455 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 DDAH1O94760 285 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 CXCL10P02778 98 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 PTK7Q13308 1070 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
ALMS1-202ENST00000464408 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 MLXIPQ9HAP2 919 aa16.76■□□□□ 0.27
ALMS1-202ENST00000464408 MEIS2O14770 477 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 BAIAP3O94812 1187 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 LGALS2P05162 132 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 TGFB3P10600 412 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 TRAF1Q13077 416 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 CNKSR3Q6P9H4 555 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 TRIM50Q86XT4 487 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
ALMS1-202ENST00000464408 ARNTL2Q8WYA1 636 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
ALMS1-202ENST00000464408 INPP4AQ96PE3 977 aaPredicted RBP16.75■□□□□ 0.27
ALMS1-202ENST00000464408 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 THEGQ9P2T0 379 aa16.75■□□□□ 0.27
ALMS1-202ENST00000464408 SPATA31C2B4DYI2 1134 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 ICAM3P32942 547 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 KCNJ6P48051 423 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
ALMS1-202ENST00000464408 SMARCC2Q8TAQ2 1214 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms