RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 EYSQ5T1H1 3165 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 SLC27A2O14975 620 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 BAIAP3O94812 1187 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 CALM1P0DP23 149 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 CALM2P0DP24 149 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 CALM3P0DP25 149 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 SELPP16109 830 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 ICAM3P32942 547 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 SP2Q02086 613 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 PTK7Q13308 1070 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 COL25A1Q9BXS0 654 aaPredicted RBP16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 HDAC6Q9UBN7 1215 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
SNRNP40-203ENST00000463988 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
SNRNP40-203ENST00000463988 SCN5AQ14524 2016 aa16.58■□□□□ 0.25
SNRNP40-203ENST00000463988 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 ZNF286BP0CG31 522 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 RABGGTBP53611 331 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 DHX38Q92620 1227 aaKnown RBP16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 ALG1Q9BT22 464 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 SEC63Q9UGP8 760 aaKnown RBP16.58■□□□□ 0.24
SNRNP40-203ENST00000463988 TRIP12Q14669 1992 aaPredicted RBP16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 NEDD9Q14511 834 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 PPP2R2DQ66LE6 453 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 LRRC8DQ7L1W4 858 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 CUL5Q93034 780 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 TET1Q8NFU7 2136 aa16.57■□□□□ 0.24
SNRNP40-203ENST00000463988 GBF1Q92538 1859 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 MEIS2O14770 477 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 FIBPO43427 364 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 CXCL10P02778 98 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 CKBP12277 381 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 GPNMBQ14956 572 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 PCNX4Q63HM2 1172 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 METTL7BQ6UX53 244 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 SGMS1Q86VZ5 419 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 SRBD1Q8N5C6 995 aaKnown RBP16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 USP38Q8NB14 1042 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 SLC12A7Q9Y666 1083 aa16.56■□□□□ 0.24
SNRNP40-203ENST00000463988 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 MYOGP15173 224 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 TRIM71Q2Q1W2 868 aaKnown RBP16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 SENP7Q9BQF6 1050 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
SNRNP40-203ENST00000463988 VCANP13611 3396 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 TRANK1O15050 2925 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 H3BRB1 525 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 NOP56O00567 594 aaKnown RBP16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 SORBS3O60504 671 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 EFCAB14O75071 495 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 HOXC8P31273 242 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 SEMA3FQ13275 785 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 SERINC5Q86VE9 423 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 SYMPKQ92797 1274 aaKnown RBP16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 PSTPIP2Q9H939 334 aa16.54■□□□□ 0.24
SNRNP40-203ENST00000463988 ABHD14A-ACY1A0A1B0GW23 586 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 NBNO60934 754 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 LGALS2P05162 132 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 CA3P07451 260 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 IGFBP4P22692 258 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 KCNJ6P48051 423 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 WDR5P61964 334 aaKnown RBP16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 ZNF200P98182 395 aaPredicted RBP16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
SNRNP40-203ENST00000463988 TRAF7Q6Q0C0 670 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms