RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 STAG2Q8N3U4 1231 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
TMEM54-203ENST00000463914 PDCD2LQ9BRP1 358 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 KATNAL1Q9BW62 490 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 IL25Q9H293 177 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
TMEM54-203ENST00000463914 BDP1A6H8Y1 2624 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 FAM86C2PA6NEL3 165 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 PARNO95453 639 aaKnown RBP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 GGPS1O95749 300 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 UBA1P22314 1058 aaKnown RBP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 GHRHRQ02643 423 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 SLC35G1Q2M3R5 365 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 HSDL1Q3SXM5 330 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 TGS1Q96RS0 853 aaKnown RBP11.92□□□□□ -0.5
TMEM54-203ENST00000463914 RAD9AQ99638 391 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 MAF1Q9H063 256 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 CD320Q9NPF0 282 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 C11orf16Q9NQ32 467 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 TRANK1O15050 2925 aa11.92□□□□□ -0.5
TMEM54-203ENST00000463914 LGR5O75473 907 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
TMEM54-203ENST00000463914 IKBKEQ14164 716 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 IMMTQ16891 758 aaKnown RBP11.91□□□□□ -0.5
TMEM54-203ENST00000463914 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
TMEM54-203ENST00000463914 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 MYOCDQ8IZQ8 938 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 SPATA33Q96N06 139 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 C17orf80Q9BSJ5 609 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 DSCC1Q9BVC3 393 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 UBE2ZQ9H832 354 aaPredicted RBP11.91□□□□□ -0.5
TMEM54-203ENST00000463914 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
TMEM54-203ENST00000463914 KLRF2D3W0D1 207 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 EFCAB14O75071 495 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 THPOP40225 353 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 NT5C2P49902 561 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 SP2Q02086 613 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 PGM5Q15124 567 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 SEC23AQ15436 765 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 TMEM31Q5JXX7 168 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 IFIT1BQ5T764 474 aaKnown RBP11.9□□□□□ -0.5
TMEM54-203ENST00000463914 MYSM1Q5VVJ2 828 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 CHD1LQ86WJ1 897 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 DBF4BQ8NFT6 615 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 C16orf70Q9BSU1 422 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 OSBPL7Q9BZF2 842 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 KRT23Q9C075 422 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 PCDHA1Q9Y5I3 950 aa11.9□□□□□ -0.5
TMEM54-203ENST00000463914 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 ZBTB5O15062 677 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 CTSHP09668 335 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 IL9P15248 144 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 KCNA5P22460 613 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 TRIM50Q86XT4 487 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 MAD2L2Q9UI95 211 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
TMEM54-203ENST00000463914 EMSYQ7Z589 1322 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
TMEM54-203ENST00000463914 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 TREHO43280 583 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 IGHDP01880 384 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 AMHP03971 560 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 LGALS2P05162 132 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 CCND2P30279 289 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 HOXC8P31273 242 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 HTRA4P83105 476 aaPredicted RBP11.88□□□□□ -0.51
TMEM54-203ENST00000463914 NUCB1Q02818 461 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 PLEKHG4Q58EX7 1191 aa11.88□□□□□ -0.51
TMEM54-203ENST00000463914 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
TMEM54-203ENST00000463914 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
TMEM54-203ENST00000463914 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms