RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLC12A7Q9Y666 1083 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 SLC4A7Q9Y6M7 1214 aa23.71■■□□□ 1.39
PDLIM4-205ENST00000463615 MFSD10Q14728 455 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 HSDL1Q3SXM5 330 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 FANCBQ8NB91 859 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 MAFAQ8NHW3 353 aaPredicted RBP23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 PPP1R13LQ8WUF5 828 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 SPATA33Q96N06 139 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 MSRAQ9UJ68 235 aa23.7■■□□□ 1.38
PDLIM4-205ENST00000463615 MYH7BA7E2Y1 1941 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 SPATA31C2B4DYI2 1134 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 CDC45O75419 566 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 PARNO95453 639 aaKnown RBP23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 FOSL2P15408 326 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 EXOSC10Q01780 885 aaKnown RBP23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 PCNX4Q63HM2 1172 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 TMTC3Q6ZXV5 915 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 TEX2Q8IWB9 1127 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 C7orf31Q8N865 590 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 PIBF1Q8WXW3 757 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 CUL5Q93034 780 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 NEK1Q96PY6 1258 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 HDAC6Q9UBN7 1215 aa23.69■■□□□ 1.38
PDLIM4-205ENST00000463615 ACTN1P12814 892 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 NEDD9Q14511 834 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 KIAA0753Q2KHM9 967 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 USP17L6PQ6QN14 398 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 SMARCC2Q8TAQ2 1214 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 DHX38Q92620 1227 aaKnown RBP23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 GPKOWQ92917 476 aaPredicted RBP eCLIP23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 C16orf70Q9BSU1 422 aa23.68■■□□□ 1.38
PDLIM4-205ENST00000463615 SCN5AQ14524 2016 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 CUL9Q8IWT3 2517 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 FIBPO43427 364 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 ZNF286BP0CG31 522 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 SEMA3FQ13275 785 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 PTK7Q13308 1070 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 METTL7BQ6UX53 244 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 DHX32Q7L7V1 743 aaKnown RBP23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 DEFB128Q7Z7B8 93 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 PHOSPHO2Q8TCD6 241 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 SENP7Q9BQF6 1050 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 LRRC2Q9BYS8 371 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 MLXIPQ9HAP2 919 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 YBX2Q9Y2T7 364 aaKnown RBP23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 PCDHA11Q9Y5I1 949 aa23.67■■□□□ 1.38
PDLIM4-205ENST00000463615 SELPP16109 830 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 RXRAP19793 462 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 HOXC8P31273 242 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 KRT32Q14532 448 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 GPNMBQ14956 572 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 APOA5Q6Q788 366 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 RASEFQ8IZ41 740 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 KCNB2Q92953 911 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 PSTPIP2Q9H939 334 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 A0A0C4DFX4 3053 aa23.66■■□□□ 1.38
PDLIM4-205ENST00000463615 DLL1O00548 723 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 BAIAP3O94812 1187 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 CXCL10P02778 98 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 ATP2A2P16615 1042 aaKnown RBP23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 RCAN1P53805 252 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 CHMP4BP1P59074 171 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 TRIM71Q2Q1W2 868 aaKnown RBP23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 CMTR1Q8N1G2 835 aaKnown RBP23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 ZFP91Q96JP5 570 aaPredicted RBP23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 SLC9A7Q96T83 725 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 ALG1Q9BT22 464 aa23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 RBM28Q9NW13 759 aaKnown RBP23.65■■□□□ 1.38
PDLIM4-205ENST00000463615 CHD9Q3L8U1 2897 aa23.64■■□□□ 1.38
PDLIM4-205ENST00000463615 TRIP12Q14669 1992 aaPredicted RBP23.64■■□□□ 1.38
PDLIM4-205ENST00000463615 ZBBXA8MT70 800 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 SYNE3Q6ZMZ3 975 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 LRRC8DQ7L1W4 858 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 MICU3Q86XE3 530 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 TET1Q8NFU7 2136 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 USP26Q9BXU7 913 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 NKX2-4Q9H2Z4 354 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 BCAS3Q9H6U6 928 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 SLC28A3Q9HAS3 691 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 GBF1Q92538 1859 aa23.64■■□□□ 1.37
PDLIM4-205ENST00000463615 LGALS2P05162 132 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 HMGB1P09429 215 aaKnown RBP23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 CKBP12277 381 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 FUT2Q10981 343 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 ADCK5Q3MIX3 580 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 TRAF7Q6Q0C0 670 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 GPRASP2Q96D09 838 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 RTEL1Q9NZ71 1219 aa23.63■■□□□ 1.37
PDLIM4-205ENST00000463615 CNTNAP5Q8WYK1 1306 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 H3BRB1 525 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 HIC1Q14526 733 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 NLRX1Q86UT6 975 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 SERINC5Q86VE9 423 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 GIMAP8Q8ND71 665 aaPredicted RBP23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 CDHR1Q96JP9 859 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 GPR20Q99678 358 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 TUT1Q9H6E5 874 aaKnown RBP23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 BRPF3Q9ULD4 1205 aa23.62■■□□□ 1.37
PDLIM4-205ENST00000463615 UNC80Q8N2C7 3258 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms