RNA–Protein interactions for RNA: ENST00000463609.1

DMD-217, Transcript of dystrophin, humanhuman

TSL 4

Gene DMD, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-217ENST00000463609 UBE2HP62256 183 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 STK38Q15208 465 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 ZNF174Q15697 407 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 HAS1Q92839 578 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 ERO1AQ96HE7 468 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 RAB34Q9BZG1 259 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 R3HDMLQ9H3Y0 253 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
DMD-217ENST00000463609 FBXO2Q9UK22 296 aaPredicted RBP13.8□□□□□ -0.2
DMD-217ENST00000463609 CNPY2Q9Y2B0 182 aa13.8□□□□□ -0.2
DMD-217ENST00000463609 WNT7AO00755 349 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 FIBPO43427 364 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 PEX10O60683 326 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 TRPA1O75762 1119 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 RGS20O76081 388 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 MCM7P33993 719 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 CALCRLQ16602 461 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
DMD-217ENST00000463609 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 ELOA2Q8IYF1 753 aaPredicted RBP13.79□□□□□ -0.2
DMD-217ENST00000463609 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
DMD-217ENST00000463609 APBA2Q99767 749 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 PYM1Q9BRP8 204 aaKnown RBP13.79□□□□□ -0.2
DMD-217ENST00000463609 TINF2Q9BSI4 451 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 KCNH7Q9NS40 1196 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 PCDHA7Q9UN72 937 aa13.79□□□□□ -0.2
DMD-217ENST00000463609 TNPO2O14787 897 aaKnown RBP13.78□□□□□ -0.2
DMD-217ENST00000463609 MSH4O15457 936 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 SLC37A4O43826 429 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 FKTNO75072 461 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PSMD10O75832 226 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 TDP2O95551 362 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
DMD-217ENST00000463609 ZNF76P36508 570 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PSMC4P43686 418 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 MTMR1Q13613 665 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
DMD-217ENST00000463609 PLA2G4DQ86XP0 818 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 MCM3APO60318 1980 aa13.78□□□□□ -0.2
DMD-217ENST00000463609 IPO5O00410 1097 aaKnown RBP13.77□□□□□ -0.21
DMD-217ENST00000463609 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
DMD-217ENST00000463609 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
DMD-217ENST00000463609 CTGFP29279 349 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 PDE4DQ08499 809 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 SPIRE1Q08AE8 756 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 GRM1Q13255 1194 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 PRR16Q569H4 304 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 OTOP1Q7RTM1 612 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 LOXHD1Q8IVV2 1947 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 IL31RAQ8NI17 732 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
DMD-217ENST00000463609 TRIM47Q96LD4 638 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 TMEM60Q9H2L4 133 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 AGO4Q9HCK5 861 aaKnown RBP13.77□□□□□ -0.21
DMD-217ENST00000463609 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 HPSEQ9Y251 543 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 Q9Y3F1 56 aa13.77□□□□□ -0.21
DMD-217ENST00000463609 MBD3O95983 291 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 PGK2P07205 417 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 SFNP31947 248 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 ME1P48163 572 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 NKX3-2P78367 333 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 HTRA3P83110 453 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 NEDD9Q14511 834 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 NBR1Q14596 966 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 IL17AQ16552 155 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 HYIQ5T013 277 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 RESP18Q5W5W9 173 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 SCFD2Q8WU76 684 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 FTOQ9C0B1 505 aaKnown RBP eCLIP13.76□□□□□ -0.21
DMD-217ENST00000463609 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
DMD-217ENST00000463609 USP25Q9UHP3 1055 aa13.76□□□□□ -0.21
DMD-217ENST00000463609 ATG7O95352 703 aa13.75□□□□□ -0.21
DMD-217ENST00000463609 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
DMD-217ENST00000463609 KCNA2P16389 499 aa13.75□□□□□ -0.21
DMD-217ENST00000463609 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
DMD-217ENST00000463609 KRT76Q01546 638 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms