RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 PCSK9Q8NBP7 692 aaKnown RBP10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 DAGLBQ8NCG7 672 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 FBXO18Q8NFZ0 1043 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 VTI1AQ96AJ9 217 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 TSEN34Q9BSV6 310 aaKnown RBP10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 BRMS1Q9HCU9 246 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 GJB4Q9NTQ9 266 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 TMEM260Q9NX78 707 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 PCDHA6Q9UN73 950 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 Q9Y3F1 56 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 PCDHA8Q9Y5H6 950 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 MRVI1Q9Y6F6 885 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 FRMPD4Q14CM0 1322 aa10.47□□□□□ -0.73
TRAPPC12-214ENST00000462983 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 H0YGN5 161 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ADAMTS3O15072 1205 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 NKRFO15226 690 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 FOSP01100 380 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 SYT1P21579 422 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 RTP1P59025 263 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 PKP1Q13835 747 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 JAKMIP3Q5VZ66 844 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ANO3Q9BYT9 981 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ZMYND12Q9H0C1 365 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 STARD7Q9NQZ5 370 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ZMYND8Q9ULU4 1186 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 MTMR6Q9Y217 621 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ATP11BQ9Y2G3 1177 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 ZDHHC9Q9Y397 364 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 NR2E3Q9Y5X4 410 aa10.46□□□□□ -0.73
TRAPPC12-214ENST00000462983 LTBP2Q14767 1821 aa10.46□□□□□ -0.74
TRAPPC12-214ENST00000462983 ZEB2O60315 1214 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 BRD1O95696 1058 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 GH1P01241 217 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 MMP1P03956 469 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 HSP90AA1P07900 732 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 MYL3P08590 195 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 SYN1P17600 705 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 CLK2P49760 499 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 CPT1AP50416 773 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 NKX3-2P78367 333 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 SP2Q02086 613 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 TRIM60Q495X7 471 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 KRT40Q6A162 431 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 RASGRP4Q8TDF6 673 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 C8orf76Q96K31 380 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 GLT1D1Q96MS3 346 aa10.45□□□□□ -0.74
TRAPPC12-214ENST00000462983 STX6O43752 255 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 PQBP1O60828 265 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 STAM2O75886 525 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 GGPS1O95749 300 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 PDIA4P13667 645 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 PDCP20941 246 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 ZNF76P36508 570 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 FOSBP53539 338 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 PSMC6P62333 389 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 ARHGAP1Q07960 439 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 GNL2Q13823 731 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 SNX17Q15036 470 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 SAFBQ15424 915 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 BRDTQ58F21 947 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 PRPF38BQ5VTL8 546 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 LARP1BQ659C4 914 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 XRRA1Q6P2D8 792 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 DHX37Q8IY37 1157 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 REXO1Q8N1G1 1221 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 INPP4AQ96PE3 977 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 BCAS3Q9H6U6 928 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 KCNJ14Q9UNX9 436 aa10.44□□□□□ -0.74
TRAPPC12-214ENST00000462983 ELP1O95163 1332 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 A0A0U1RQG5 324 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 A6NJR5 290 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 SPATA31C2B4DYI2 1134 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 KIF28PB7ZC32 967 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 FIBPO43427 364 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 MMP3P08254 477 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 TGFB3P10600 412 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 ITGB5P18084 799 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 U2AF2P26368 475 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■□□□ 13.5
TRAPPC12-214ENST00000462983 CHMP4BP1P59074 171 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 PURAQ00577 322 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 GUCY1B3Q02153 619 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 TLE2Q04725 743 aa10.43□□□□□ -0.74
TRAPPC12-214ENST00000462983 RESTQ13127 1097 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms