RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MCCP23508 829 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 IRS1P35568 1242 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 LTBRP36941 435 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 PPP2R5BQ15173 497 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 PTGISQ16647 500 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 CSPP1Q1MSJ5 1256 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 CCDC62Q6P9F0 684 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 BTNL9Q6UXG8 535 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 SLC30A10Q6XR72 485 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 KCTD1Q719H9 257 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 ADHFE1Q8IWW8 467 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 ZNF444Q8N0Y2 327 aaPredicted RBP9.15□□□□□ -0.94
SMC3-202ENST00000462899 CLEC4DQ8WXI8 215 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 APPBP2Q92624 585 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 WNT8BQ93098 351 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 PABPC5Q96DU9 382 aaKnown RBP9.15□□□□□ -0.94
SMC3-202ENST00000462899 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 IL17RBQ9NRM6 502 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 ADD3Q9UEY8 706 aaKnown RBP9.15□□□□□ -0.94
SMC3-202ENST00000462899 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMC3-202ENST00000462899 FRYLO94915 3013 aa9.15□□□□□ -0.95
SMC3-202ENST00000462899 RAD50Q92878 1312 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 M0R2C6 588 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 FOXP2O15409 715 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 EFCAB14O75071 495 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 MMP3P08254 477 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 LINC00271P0C7V0 271 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 TSPY3P0CV98 308 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 TSPY8P0CW00 308 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 TIGD5Q53EQ6 642 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 HERC4Q5GLZ8 1057 aaPredicted RBP9.14□□□□□ -0.95
SMC3-202ENST00000462899 IFNL3Q8IZI9 196 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 CCDC155Q8N6L0 562 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 SCFD2Q8WU76 684 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 GVINP1Q7Z2Y8 2422 aa9.14□□□□□ -0.95
SMC3-202ENST00000462899 DOCK5Q9H7D0 1870 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 H3BNC9 293 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 HAS3O00219 553 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 GNAT2P19087 354 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 TFAP4Q01664 338 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 ARHGAP1Q07960 439 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 TCF15Q12870 199 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 SMAD2Q15796 467 aaKnown RBP9.13□□□□□ -0.95
SMC3-202ENST00000462899 EPC2Q52LR7 807 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 BRDTQ58F21 947 aaPredicted RBP9.13□□□□□ -0.95
SMC3-202ENST00000462899 TCEAL5Q5H9L2 206 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMC3-202ENST00000462899 BMP8AQ7Z5Y6 402 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 INSL6Q9Y581 213 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 TTC3P53804 2025 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
SMC3-202ENST00000462899 PTPRZ1P23471 2315 aaPredicted RBP9.13□□□□□ -0.95
SMC3-202ENST00000462899 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
SMC3-202ENST00000462899 NMT2O60551 498 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 LGR5O75473 907 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 F2P00734 622 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 TXNP10599 105 aaKnown RBP9.12□□□□□ -0.95
SMC3-202ENST00000462899 HOXD8P13378 290 aaPredicted RBP9.12□□□□□ -0.95
SMC3-202ENST00000462899 TDO2P48775 406 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 RPS6P62753 249 aaKnown RBP9.12□□□□□ -0.95
SMC3-202ENST00000462899 IKQ13123 557 aaPredicted RBP9.12□□□□□ -0.95
SMC3-202ENST00000462899 PTK7Q13308 1070 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 HIC1Q14526 733 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 ZNF618Q5T7W0 954 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 ADGRD1Q6QNK2 874 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 BANK1Q8NDB2 785 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 DCAF4Q8WV16 495 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 AFG1LQ8WV93 481 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 SAMD11Q96NU1 681 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 ZBTB40Q9NUA8 1239 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 CTNNA3Q9UI47 895 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 MUTYHQ9UIF7 546 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 NOD1Q9Y239 953 aa9.12□□□□□ -0.95
SMC3-202ENST00000462899 LOXHD1Q8IVV2 1947 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 WDR19Q8NEZ3 1342 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 PTPDC1A2A3K4 754 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 RNF113AO15541 343 aaKnown RBP9.11□□□□□ -0.95
SMC3-202ENST00000462899 MBTPS2O43462 519 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 FGRP09769 529 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 HOXC8P31273 242 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 PDE4BQ07343 736 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 DLX2Q07687 328 aaPredicted RBP9.11□□□□□ -0.95
SMC3-202ENST00000462899 PPARAQ07869 468 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 IKBKEQ14164 716 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms