RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 APBA2Q99767 749 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
RTF1-202ENST00000462276 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 FTOQ9C0B1 505 aaKnown RBP eCLIP12.07□□□□□ -0.48
RTF1-202ENST00000462276 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 VTA1Q9NP79 307 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 MYH6P13533 1939 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 WNT7AO00755 349 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 SLC37A4O43826 429 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 MBD3O95983 291 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
RTF1-202ENST00000462276 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
RTF1-202ENST00000462276 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
RTF1-202ENST00000462276 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 SLC5A5Q92911 643 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 TRIM47Q96LD4 638 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 FGD4Q96M96 766 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
RTF1-202ENST00000462276 TINF2Q9BSI4 451 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 ZNF577Q9BSK1 485 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 TMEM60Q9H2L4 133 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 KCNH7Q9NS40 1196 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
RTF1-202ENST00000462276 PCDHA7Q9UN72 937 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 PARP14Q460N5 1801 aa12.06□□□□□ -0.48
RTF1-202ENST00000462276 IPO5O00410 1097 aaKnown RBP12.05□□□□□ -0.48
RTF1-202ENST00000462276 MSH4O15457 936 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 TXLNAP40222 546 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 UBXN2AP68543 259 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 NEDD9Q14511 834 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 AXDND1Q5T1B0 1012 aaPredicted RBP12.05□□□□□ -0.48
RTF1-202ENST00000462276 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 CYP2W1Q8TAV3 490 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 HAS1Q92839 578 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
RTF1-202ENST00000462276 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
RTF1-202ENST00000462276 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 FAM13BQ9NYF5 915 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 ASTN1O14525 1302 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 NFASCO94856 1347 aa12.05□□□□□ -0.48
RTF1-202ENST00000462276 FAM237AA0A1B0GTK4 181 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
RTF1-202ENST00000462276 GAS7O60861 476 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 PSMD10O75832 226 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 IGHA2P01877 340 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 TXKP42681 527 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 KRT76Q01546 638 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 CCDC34Q96HJ3 373 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 SDF4Q9BRK5 362 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
RTF1-202ENST00000462276 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
RTF1-202ENST00000462276 VWA3AA6NCI4 1184 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 NKRFO15226 690 aaKnown RBP eCLIP12.03□□□□□ -0.48
RTF1-202ENST00000462276 CAPN15O75808 1086 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 RGS20O76081 388 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 ARP10275 920 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 MUTP22033 750 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 SFNP31947 248 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 UBA7P41226 1012 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 TECP42680 631 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 FLT3LGP49771 235 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 PPP2R5CQ13362 524 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 NFKBIBQ15653 356 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 IQSEC1Q6DN90 963 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
RTF1-202ENST00000462276 CCDC73Q6ZRK6 1079 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 NPLOC4Q8TAT6 608 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 ZNF296Q8WUU4 475 aaPredicted RBP12.03□□□□□ -0.48
RTF1-202ENST00000462276 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
RTF1-202ENST00000462276 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 LRWD1Q9UFC0 647 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 MRVI1Q9Y6F6 885 aa12.03□□□□□ -0.48
RTF1-202ENST00000462276 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
RTF1-202ENST00000462276 CYP2B6P20813 491 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 CTGFP29279 349 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 JAK3P52333 1124 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 ACVR2BQ13705 512 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 IL17AQ16552 155 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms