RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 HIC1Q14526 733 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 GRIN2CQ14957 1233 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 PTGISQ16647 500 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 DGKDQ16760 1214 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
NUP50-213ENST00000461437 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 FANCBQ8NB91 859 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 PPTC7Q8NI37 304 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 HERVK_113Q902F9 699 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 DHX38Q92620 1227 aaKnown RBP17.89■□□□□ 0.45
NUP50-213ENST00000461437 TIFAQ96CG3 184 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 SPATA33Q96N06 139 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 FRMPD4Q14CM0 1322 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 KAT6AQ92794 2004 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 TRAF1Q13077 416 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 MFSD10Q14728 455 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 APOA5Q6Q788 366 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 WNT8BQ93098 351 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 EMID1Q96A84 441 aaPredicted RBP17.88■□□□□ 0.45
NUP50-213ENST00000461437 LZTS2Q9BRK4 669 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
NUP50-213ENST00000461437 IQCF3P0C7M6 154 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 CALM1P0DP23 149 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 CALM2P0DP24 149 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 CALM3P0DP25 149 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 MYOGP15173 224 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 SMARCA1P28370 1054 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 GNAQP50148 359 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 SP4Q02446 784 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
NUP50-213ENST00000461437 HEATR3Q7Z4Q2 680 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 SGMS1Q86VZ5 419 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 SAMD3Q8N6K7 520 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 CUL5Q93034 780 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 NKX2-4Q9H2Z4 354 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 MLXIPQ9HAP2 919 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 GTF2IRD1Q9UHL9 959 aa17.87■□□□□ 0.45
NUP50-213ENST00000461437 NAP1L2Q9ULW6 460 aaPredicted RBP17.87■□□□□ 0.45
NUP50-213ENST00000461437 YBX2Q9Y2T7 364 aaKnown RBP17.87■□□□□ 0.45
NUP50-213ENST00000461437 KLF18A0A0U1RQI7 1052 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 HAS3O00219 553 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 F2P00734 622 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 PTPN11Q06124 597 aaPredicted RBP17.86■□□□□ 0.45
NUP50-213ENST00000461437 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 CYFIP1Q7L576 1253 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 C7orf31Q8N865 590 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 PGBD1Q96JS3 809 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 ZNF576Q9H609 170 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 PKD2L1Q9P0L9 805 aa17.86■□□□□ 0.45
NUP50-213ENST00000461437 FOSL2P15408 326 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 CDC27P30260 824 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 RTN1Q16799 776 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 WWC2Q6AWC2 1192 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 RPUSD2Q8IZ73 545 aaKnown RBP17.85■□□□□ 0.45
NUP50-213ENST00000461437 RETREG2Q8NC44 543 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
NUP50-213ENST00000461437 C16orf70Q9BSU1 422 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
NUP50-213ENST00000461437 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 SPATA31C2B4DYI2 1134 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 PIK3CDO00329 1044 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 ZBTB43O43298 467 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 HOXD8P13378 290 aaPredicted RBP17.84■□□□□ 0.45
NUP50-213ENST00000461437 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 GPNMBQ14956 572 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 TCTN1Q2MV58 587 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 TSGA10IPQ3SY00 556 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 UTP14CQ5TAP6 766 aaKnown RBP17.84■□□□□ 0.45
NUP50-213ENST00000461437 KCNV1Q6PIU1 500 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 SESTD1Q86VW0 696 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 MAFAQ8NHW3 353 aaPredicted RBP17.84■□□□□ 0.45
NUP50-213ENST00000461437 JAKMIP1Q96N16 626 aaKnown RBP17.84■□□□□ 0.45
NUP50-213ENST00000461437 FTOQ9C0B1 505 aaKnown RBP eCLIP17.84■□□□□ 0.45
NUP50-213ENST00000461437 PRDM12Q9H4Q4 367 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 FAM217BQ9NTX9 383 aaPredicted RBP17.84■□□□□ 0.45
NUP50-213ENST00000461437 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
NUP50-213ENST00000461437 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 ATP9AO75110 1047 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 LGALS2P05162 132 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 ICAM3P32942 547 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 FUT2Q10981 343 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 BFSP2Q13515 415 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 PCNX4Q63HM2 1172 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 Q6ZUG5 572 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 TMCO2Q7Z6W1 182 aaPredicted RBP17.83■□□□□ 0.44
NUP50-213ENST00000461437 KATNAL1Q9BW62 490 aa17.83■□□□□ 0.44
NUP50-213ENST00000461437 MTIF3Q9H2K0 278 aaKnown RBP17.83■□□□□ 0.44
NUP50-213ENST00000461437 NOP56O00567 594 aaKnown RBP17.82■□□□□ 0.44
NUP50-213ENST00000461437 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 FIBPO43427 364 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms