RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 DUSP28Q4G0W2 176 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.35
SSBP1-202ENST00000461433 ANO1Q5XXA6 986 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 NIPA1Q7RTP0 329 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 NEK8Q86SG6 692 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 GPRASP2Q96D09 838 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-202ENST00000461433 FIBPO43427 364 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 ATP9AO75110 1047 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 ARP10275 920 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 TXNP10599 105 aaKnown RBP12.83□□□□□ -0.36
SSBP1-202ENST00000461433 TGFB3P10600 412 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
SSBP1-202ENST00000461433 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-202ENST00000461433 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 LY6KQ17RY6 165 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 GNPTABQ3T906 1256 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 COPS5Q92905 334 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
SSBP1-202ENST00000461433 CTAGE5O15320 804 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 MAFGO15525 162 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 DUSP11O75319 330 aaKnown RBP12.82□□□□□ -0.36
SSBP1-202ENST00000461433 GJB1P08034 283 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 DDIT3P35638 169 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 ZNF76P36508 570 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-202ENST00000461433 MTMR1Q13613 665 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 Q4G0T1 1027 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 PPP4R3AQ6IN85 833 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 PLA2G4DQ86XP0 818 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
SSBP1-202ENST00000461433 SLC37A4O43826 429 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 MSCO60682 206 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 KCNA2P16389 499 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 UBA1P22314 1058 aaKnown RBP12.81□□□□□ -0.36
SSBP1-202ENST00000461433 NKX3-2P78367 333 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 RESTQ13127 1097 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
SSBP1-202ENST00000461433 PRR16Q569H4 304 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
SSBP1-202ENST00000461433 Q9Y3F1 56 aa12.81□□□□□ -0.36
SSBP1-202ENST00000461433 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 NKRFO15226 690 aaKnown RBP eCLIP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 MSH4O15457 936 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 SGPL1O95470 568 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 RARBP10826 455 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 GJA8P48165 433 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 GJA9P57773 515 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 MYSM1Q5VVJ2 828 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 U2AF1L4Q8WU68 220 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 UIMC1Q96RL1 719 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 UPF3AQ9H1J1 476 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 OGDHLQ9ULD0 1010 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 MYADML2A6NDP7 307 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 DHX15O43143 795 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 PGK1P00558 417 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 TRAPPC10P48553 1259 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 SETQ01105 290 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 NBR1Q14596 966 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 CELF3Q5SZQ8 465 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 TLK2Q86UE8 772 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 CDHR1Q96JP9 859 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 PKD2L1Q9P0L9 805 aa12.8□□□□□ -0.36
SSBP1-202ENST00000461433 DDX25Q9UHL0 483 aaKnown RBP12.8□□□□□ -0.36
SSBP1-202ENST00000461433 FARP2O94887 1054 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-202ENST00000461433 GGPS1O95749 300 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 GH1P01241 217 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-202ENST00000461433 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-202ENST00000461433 FAM173BQ6P4H8 233 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 CYFIP1Q7L576 1253 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
SSBP1-202ENST00000461433 HAS1Q92839 578 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms