RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 ABCB11O95342 1321 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 CDH23Q9H251 3354 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 B4E1Z4 1266 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 LCE2BO14633 110 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 KPNA6O60684 536 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 SUPT20HL2P0C7V6 817 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 EDNRBP24530 442 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 CLCN1P35523 988 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 USH1GQ495M9 461 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 ENAHQ8N8S7 591 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-220ENST00000461409 OR6J1Q8NGC5 347 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 TIFAQ96CG3 184 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 NOC4LQ9BVI4 516 aaKnown RBP10.15□□□□□ -0.78
HDAC9-220ENST00000461409 TRPV6Q9H1D0 765 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 ALDH8A1Q9H2A2 487 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-220ENST00000461409 IL23AQ9NPF7 189 aa10.15□□□□□ -0.78
HDAC9-220ENST00000461409 CHD9Q3L8U1 2897 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 GRIN2DO15399 1336 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 TNKSO95271 1327 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 RNF223E7ERA6 249 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 B4GALT4O60513 344 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 S1PR4O95977 384 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 PARP1P09874 1014 aaKnown RBP10.14□□□□□ -0.79
HDAC9-220ENST00000461409 GOLGA8HP0CJ92 632 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 PSMC6P62333 389 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 PURAQ00577 322 aaKnown RBP10.14□□□□□ -0.79
HDAC9-220ENST00000461409 CDC37Q16543 378 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-220ENST00000461409 RASIP1Q5U651 963 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 ZNF365Q70YC5 407 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 C16orf59Q7L2K0 433 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 MYLIPQ8WY64 445 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 THAP11Q96EK4 314 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 MTG1Q9BT17 334 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-220ENST00000461409 UBA5Q9GZZ9 404 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 ZNF576Q9H609 170 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 ZSWIM5Q9P217 1185 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
HDAC9-220ENST00000461409 A6NJR5 290 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 DHX16O60231 1041 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 FGBP02675 491 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 PFKMP08237 780 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 MYL3P08590 195 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 ACRP10323 421 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 TXNP10599 105 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 PTGS1P23219 599 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 TTLL4Q14679 1199 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 RAB30Q15771 203 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 TMEM63BQ5T3F8 832 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 IFIT1BQ5T764 474 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 NFRKBQ6P4R8 1299 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 RPUSD2Q8IZ73 545 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 ADGRF4Q8IZF3 695 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 NSUN6Q8TEA1 469 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 IWS1Q96ST2 819 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 MSRAQ9UJ68 235 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 MRPL11Q9Y3B7 192 aaKnown RBP10.13□□□□□ -0.79
HDAC9-220ENST00000461409 LCTP09848 1927 aa10.13□□□□□ -0.79
HDAC9-220ENST00000461409 CCL23P55773 120 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 PTPN11Q06124 597 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-220ENST00000461409 TRDNQ13061 729 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 TRAF1Q13077 416 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 GRIN2CQ14957 1233 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 QRICH1Q2TAL8 776 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 FBXO11Q86XK2 927 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 PBX4Q9BYU1 374 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 CPVLQ9H3G5 476 aa10.12□□□□□ -0.79
HDAC9-220ENST00000461409 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 STXBP2Q15833 593 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 AMHR2Q16671 573 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 FAM47CQ5HY64 1035 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 TTC22Q5TAA0 569 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 OTOP2Q7RTS6 562 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 SYTL5Q8TDW5 730 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-220ENST00000461409 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 GAS2L1Q99501 681 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-220ENST00000461409 SPSB2Q99619 263 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 AMNQ9BXJ7 453 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 WNT8AQ9H1J5 351 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 JMJD4Q9H9V9 463 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 TRMT13Q9NUP7 481 aaKnown RBP10.11□□□□□ -0.79
HDAC9-220ENST00000461409 NOD1Q9Y239 953 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 SLC4A7Q9Y6M7 1214 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 VCANP13611 3396 aa10.11□□□□□ -0.79
HDAC9-220ENST00000461409 ERICH2A1L162 156 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 KLRF2D3W0D1 207 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 EIF3JO75822 258 aaKnown RBP10.1□□□□□ -0.79
HDAC9-220ENST00000461409 GH1P01241 217 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 CYP2C9P11712 490 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 ACTN1P12814 892 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 RFC2P35250 354 aa10.1□□□□□ -0.79
HDAC9-220ENST00000461409 BFSP2Q13515 415 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms