RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 BEX3Q00994 111 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 NONOQ15233 471 aaKnown RBP eCLIP15.96■□□□□ 0.15
HDLBP-229ENST00000460826 INF2Q27J81 1249 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 KRT25Q7Z3Z0 450 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 NLRX1Q86UT6 975 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 GPRASP2Q96D09 838 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 JADE2Q9NQC1 790 aa15.96■□□□□ 0.15
HDLBP-229ENST00000460826 MKI67P46013 3256 aaKnown RBP15.96■□□□□ 0.15
HDLBP-229ENST00000460826 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 KIF28PB7ZC32 967 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 NKRFO15226 690 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDLBP-229ENST00000460826 FIBPO43427 364 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 ATP9AO75110 1047 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 C6orf222P0C671 652 aaPredicted RBP15.95■□□□□ 0.14
HDLBP-229ENST00000460826 ARP10275 920 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 ARHGAP1Q07960 439 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 CEP55Q53EZ4 464 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 PIK3AP1Q6ZUJ8 805 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 OR6J1Q8NGC5 347 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 INTS4Q96HW7 963 aaKnown RBP15.95■□□□□ 0.14
HDLBP-229ENST00000460826 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 Q9Y3F1 56 aa15.95■□□□□ 0.14
HDLBP-229ENST00000460826 MEIS1O00470 390 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 FARP2O94887 1054 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-229ENST00000460826 GGPS1O95749 300 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 GH1P01241 217 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 CIITAP33076 1130 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 ZNF76P36508 570 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 NKX3-2P78367 333 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 MTMR1Q13613 665 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 CCSAPQ6IQ19 270 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-229ENST00000460826 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 UBE2Q1Q7Z7E8 422 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 ANKLE1Q8NAG6 615 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 ARRDC4Q8NCT1 418 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 UIMC1Q96RL1 719 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 PKD2L1Q9P0L9 805 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 KIF3AQ9Y496 699 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 TELO2Q9Y4R8 837 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 DNAH12Q6ZR08 3092 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 WDR81Q562E7 1941 aa15.94■□□□□ 0.14
HDLBP-229ENST00000460826 TDP2O95551 362 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 TGFB3P10600 412 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 KCNA2P16389 499 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 CST5P28325 142 aaPredicted RBP15.93■□□□□ 0.14
HDLBP-229ENST00000460826 SAFBQ15424 915 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDLBP-229ENST00000460826 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
HDLBP-229ENST00000460826 GNASQ5JWF2 1037 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 CELF3Q5SZQ8 465 aaKnown RBP15.93■□□□□ 0.14
HDLBP-229ENST00000460826 RNF180Q86T96 592 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 PLA2G4DQ86XP0 818 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 LENG9Q96B70 501 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 PAWRQ96IZ0 340 aaKnown RBP15.93■□□□□ 0.14
HDLBP-229ENST00000460826 KCNH7Q9NS40 1196 aa15.93■□□□□ 0.14
HDLBP-229ENST00000460826 KBTBD13C9JR72 458 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 DNM1LO00429 736 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 WNT7AO00755 349 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 COL6A1P12109 1028 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 CAPN2P17655 700 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 USP11P51784 963 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 KCNA10Q16322 511 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 PRR16Q569H4 304 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 LARP1BQ659C4 914 aaKnown RBP15.92■□□□□ 0.14
HDLBP-229ENST00000460826 CYFIP1Q7L576 1253 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 NIPA1Q7RTP0 329 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 NEK8Q86SG6 692 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
HDLBP-229ENST00000460826 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 AFG1LQ8WV93 481 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 FOXP1Q9H334 677 aaPredicted RBP15.92■□□□□ 0.14
HDLBP-229ENST00000460826 SPC25Q9HBM1 224 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 SCN10AQ9Y5Y9 1956 aa15.92■□□□□ 0.14
HDLBP-229ENST00000460826 PDE4DIPQ5VU43 2346 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 A6NJR5 290 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 ASGR1P07306 291 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 ITGB3BPQ13352 177 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-229ENST00000460826 LETM2Q2VYF4 491 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
HDLBP-229ENST00000460826 FERMT2Q96AC1 680 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 CDHR1Q96JP9 859 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 MBOAT7Q96N66 472 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 SENP7Q9BQF6 1050 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 AGO4Q9HCK5 861 aaKnown RBP15.91■□□□□ 0.14
HDLBP-229ENST00000460826 PHF24Q9UPV7 400 aa15.91■□□□□ 0.14
HDLBP-229ENST00000460826 CYP3A7-CYP3A51PA0A087WV96 503 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 H3BQV1 296 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 MAFGO15525 162 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 SLC37A4O43826 429 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 MMP3P08254 477 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 CYP3A7P24462 503 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.141e-6■■■□□ 15
HDLBP-229ENST00000460826 ACLYP53396 1101 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 LAMC2Q13753 1193 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 NEDD9Q14511 834 aa15.9■□□□□ 0.14
HDLBP-229ENST00000460826 HSDL1Q3SXM5 330 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms