RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 CCT5P48643 541 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 SPATS2Q86XZ4 545 aaKnown RBP13.21□□□□□ -0.29
CPNE6-202ENST00000460657 TMEM260Q9NX78 707 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 KRT5P13647 590 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 GAP43P17677 238 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
CPNE6-202ENST00000460657 KCTD16Q68DU8 428 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 VGLL2Q8N8G2 317 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
CPNE6-202ENST00000460657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.21□□□□□ -0.29
CPNE6-202ENST00000460657 SLC7A5Q01650 507 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 CEP63Q96MT8 703 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 ADAMTS1Q9UHI8 967 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 POLR2MP0CAP2 368 aa13.21□□□□□ -0.3
CPNE6-202ENST00000460657 PDE6BP35913 854 aa13.21□□□□□ -0.3
CPNE6-202ENST00000460657 ITPK1Q13572 414 aa13.21□□□□□ -0.3
CPNE6-202ENST00000460657 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PPANQ9NQ55 473 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 TARSL2A2RTX5 802 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PGRMC1O00264 195 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 LMNB1P20700 586 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 ATP5DP30049 168 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 CDKAL1Q5VV42 579 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PBKQ96KB5 322 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 KCNK9Q9NPC2 374 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 H0YIN7 160 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 DENND2CQ68D51 928 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PARP2Q9UGN5 583 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 SLIT3O75094 1523 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 ZBTB5O15062 677 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 COASYQ13057 564 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PKN1Q16512 942 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PAIP2Q9BPZ3 127 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 DPH5Q9H2P9 285 aa13.2□□□□□ -0.3
CPNE6-202ENST00000460657 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
CPNE6-202ENST00000460657 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 MEIS1O00470 390 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 TDP2O95551 362 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 FNBP1Q96RU3 617 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 STXBP3O00186 592 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 STK4Q13043 487 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 CDC37Q16543 378 aaPredicted RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
CPNE6-202ENST00000460657 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 TCHPQ9BT92 498 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
CPNE6-202ENST00000460657 COL5A2P05997 1499 aaPredicted RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 PSMD14O00487 310 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 PPARDQ03181 441 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 BIRC3Q13489 604 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 TTC19Q6DKK2 380 aaPredicted RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 HNRNPLLQ8WVV9 542 aaKnown RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 TCHHQ07283 1943 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 BACH1O14867 736 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 EZRP15311 586 aaKnown RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
CPNE6-202ENST00000460657 AP3B2Q13367 1082 aa13.18□□□□□ -0.3
CPNE6-202ENST00000460657 PDIA5Q14554 519 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms