RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ACLY	P53396	1101 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	NR5A1	Q13285	461 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	GNAS	Q5JWF2	1037 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	KIAA1217	Q5T5P2	1943 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	KRT40	Q6A162	431 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	XRRA1	Q6P2D8	792 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	CXCL17	Q6UXB2	119 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	RNF180	Q86T96	592 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	OR6J1	Q8NGC5	347 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	PPP1R13L	Q8WUF5	828 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	AFG1L	Q8WV93	481 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	LENG9	Q96B70	501 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	ALPK3	Q96L96	1907 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	MXRA8	Q9BRK3	442 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	LLPH	Q9BRT6	129 aa	Known RBP	11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	GLT8D2	Q9H1C3	349 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	JADE2	Q9NQC1	790 aa		11.73	□□□□□ -0.53
MRPL55-223	ENST00000459783	KBTBD13	C9JR72	458 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	MEIS1	O00470	390 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	NKRF	O15226	690 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	FIBP	O43427	364 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	STAM2	O75886	525 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	GGPS1	O95749	300 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	GH1	P01241	217 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	HOXD8	P13378	290 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	ATN1	P54259	1190 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	GUCY1B3	Q02153	619 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	ITGB3BP	Q13352	177 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	SNX17	Q15036	470 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	HSDL1	Q3SXM5	330 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	CELF3	Q5SZQ8	465 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	MYSM1	Q5VVJ2	828 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	FAM177A1	Q8N128	213 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	EMID1	Q96A84	441 aa	Predicted RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	GPRASP2	Q96D09	838 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	UIMC1	Q96RL1	719 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	TSEN34	Q9BSV6	310 aa	Known RBP	11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	AP5M1	Q9H0R1	490 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	PKD2L1	Q9P0L9	805 aa		11.72	□□□□□ -0.53
MRPL55-223	ENST00000459783	MOXD2P	A6NHM9	499 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	BTBD18	B2RXH4	712 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	WNT7A	O00755	349 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	MMP1	P03956	469 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	MMP3	P08254	477 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	CIITA	P33076	1130 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	PSMC6	P62333	389 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	PURA	Q00577	322 aa	Known RBP	11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	CUL4A	Q13619	759 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	GNPTAB	Q3T906	1256 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	CEP55	Q53EZ4	464 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	GALNT17	Q6IS24	598 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	SLC39A5	Q6ZMH5	540 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	BICD2	Q8TD16	824 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	TBCK	Q8TEA7	893 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	WASF1	Q92558	559 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	KAT2B	Q92831	832 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	KCNH7	Q9NS40	1196 aa		11.71	□□□□□ -0.53
MRPL55-223	ENST00000459783	KIF28P	B7ZC32	967 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	RBAK-RBAKDN	I3L0D1	243 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	TDP2	O95551	362 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	TGFB3	P10600	412 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	MCM2	P49736	904 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	MTMR1	Q13613	665 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	INF2	Q27J81	1249 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	TRIM60	Q495X7	471 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	CYFIP1	Q7L576	1253 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	DHX37	Q8IY37	1157 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	DIS3L2	Q8IYB7	885 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	SLC43A3	Q8NBI5	491 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	PCSK9	Q8NBP7	692 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	IL27	Q8NEV9	243 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	MBOAT7	Q96N66	472 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	EHMT1	Q9H9B1	1298 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	SPC25	Q9HBM1	224 aa		11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	AGO4	Q9HCK5	861 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	MKI67	P46013	3256 aa	Known RBP	11.7	□□□□□ -0.54
MRPL55-223	ENST00000459783	MYH7B	A7E2Y1	1941 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	DHX15	O43143	795 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	CCNE2	O96020	404 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	MYL3	P08590	195 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	ZNF286B	P0CG31	522 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	CPT1A	P50416	773 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	CDK7	P50613	346 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	RTP1	P59025	263 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	HMGN5	P82970	282 aa	Known RBP	11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	LAMC2	Q13753	1193 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	MCTP2	Q6DN12	878 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	KCNV1	Q6PIU1	500 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	METTL7B	Q6UX53	244 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	PIK3AP1	Q6ZUJ8	805 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	NIPA1	Q7RTP0	329 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	KRT25	Q7Z3Z0	450 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	NLRX1	Q86UT6	975 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	PLA2G4D	Q86XP0	818 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	FBXO18	Q8NFZ0	1043 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	PPTC7	Q8NI37	304 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	GJA10	Q969M2	543 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	SPATA33	Q96N06	139 aa		11.69	□□□□□ -0.54
MRPL55-223	ENST00000459783	GPR20	Q99678	358 aa		11.69	□□□□□ -0.54

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