RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 NEMFO60524 1076 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 FOSP01100 380 aaPredicted RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6DP0CG33 693 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 SCP2P22307 547 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 TXKP42681 527 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 SHC4Q6S5L8 630 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 CHST13Q8NET6 341 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 LENG9Q96B70 501 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 GLT8D2Q9H1C3 349 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6AQ9NYA3 693 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 DDX25Q9UHL0 483 aaKnown RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ARP10275 920 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ZNF76P36508 570 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 CAP1Q01518 475 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ARHGEF16Q5VV41 709 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 CCAR1Q8IX12 1150 aaKnown RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 HAS1Q92839 578 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 EPSTI1Q96J88 318 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 MAGEC2Q9UBF1 373 aaPredicted RBP11.66□□□□□ -0.54
USP39-210ENST00000459775 ELP1O95163 1332 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6L4A6NEF3 574 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 SORBS3O60504 671 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 ITGB5P18084 799 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 PTPREP23469 700 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 CTGFP29279 349 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 TECP42680 631 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
USP39-210ENST00000459775 GHRHRQ02643 423 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 PGM5Q15124 567 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 TKFCQ3LXA3 575 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 FGD4Q96M96 766 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 RPTORQ8N122 1335 aa11.65□□□□□ -0.54
USP39-210ENST00000459775 IGLV3-22A0A075B6J6 115 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 TLR2O60603 784 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 NR1I2O75469 434 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 BCRP11274 1271 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 USP11P51784 963 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 UBE2HP62256 183 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 ZKSCAN8Q15776 578 aaPredicted RBP11.65□□□□□ -0.55
USP39-210ENST00000459775 C17orf99Q6UX52 265 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.55
USP39-210ENST00000459775 FSIP1Q8NA03 581 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 ARMC5Q96C12 935 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 MTMR9Q96QG7 549 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 MMP19Q99542 508 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 ARHGAP39Q9C0H5 1083 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.55
USP39-210ENST00000459775 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 COBLO75128 1261 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 PPP6R2O75170 966 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 SLC25A27O95847 323 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 NR3C2P08235 984 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 PTGS1P23219 599 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 NDUFA8P51970 172 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 CALCRLQ16602 461 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 CCDC181Q5TID7 509 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 ADALQ6DHV7 355 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 PPP4R3AQ6IN85 833 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 DNAJC14Q6Y2X3 702 aaPredicted RBP11.64□□□□□ -0.55
USP39-210ENST00000459775 PLIN2Q99541 437 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 SRPRBQ9Y5M8 271 aaKnown RBP11.64□□□□□ -0.55
USP39-210ENST00000459775 MYH7BA7E2Y1 1941 aa11.64□□□□□ -0.55
USP39-210ENST00000459775 A0A087WWV3 80 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 A0A087X0B3 334 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 POTEMA6NI47 508 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 MSH4O15457 936 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 RGS20O76081 388 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 ZRANB2O95218 330 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP39-210ENST00000459775 OR52Z1P0C646 297 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 FCER1AP12319 257 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 ADORA2AP29274 412 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 FXR1P51114 621 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP39-210ENST00000459775 KCTD2Q14681 263 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
USP39-210ENST00000459775 FAM110CQ1W6H9 321 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
USP39-210ENST00000459775 OTOP1Q7RTM1 612 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 GPR142Q7Z601 462 aa11.63□□□□□ -0.55
USP39-210ENST00000459775 PDILTQ8N807 584 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms