RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MTMR8Q96EF0 704 aa18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 OPLAHO14841 1288 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 FCHSD1Q86WN1 690 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 CD320Q9NPF0 282 aa18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 MAP3K20Q9NYL2 800 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-204ENST00000457942 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 SORBS3O60504 671 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 ANTXR2P58335 489 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 PTPN11Q06124 597 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 TROAPQ12815 778 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 DGKDQ16760 1214 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 PDCD2LQ9BRP1 358 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 DDX41Q9UJV9 622 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-204ENST00000457942 CCDC69A6NI79 296 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 KIF28PB7ZC32 967 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 PRC1O43663 620 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 LPXNO60711 386 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 IQCF3P0C7M6 154 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 CCND2P30279 289 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 KIF5BP33176 963 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 KCNJ6P48051 423 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 BFSP2Q13515 415 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 LAMC2Q13753 1193 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 PGM5Q15124 567 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 PTGISQ16647 500 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 ALYREFQ86V81 257 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 DHX37Q8IY37 1157 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 ZNF654Q8IZM8 581 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 MYL10Q9BUA6 226 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 SEC63Q9UGP8 760 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-204ENST00000457942 CYTH3O43739 400 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 DDAH1O94760 285 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 ZNF286BP0CG31 522 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 MCM5P33992 734 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 RFC2P35250 354 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 DEFB103AP81534 67 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 GHRHRQ02643 423 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 IL31RAQ8NI17 732 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 RRP36Q96EU6 259 aaKnown RBP18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 UIMC1Q96RL1 719 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 ESYT1Q9BSJ8 1104 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 ALG1Q9BT22 464 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 ZBED2Q9BTP6 218 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 KATNAL1Q9BW62 490 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 TRIP12Q14669 1992 aaPredicted RBP18.2■□□□□ 0.5
CHCHD3-204ENST00000457942 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 FAM117BQ6P1L5 589 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 KCNV1Q6PIU1 500 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 C7orf31Q8N865 590 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 PPTC7Q8NI37 304 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 PHOSPHO2Q8TCD6 241 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 SPATA33Q96N06 139 aa18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 LSG1Q9H089 658 aaKnown RBP18.19■□□□□ 0.5
CHCHD3-204ENST00000457942 SLC27A2O14975 620 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 GPR37L1O60883 481 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 GGPS1O95749 300 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 PSEN2P49810 448 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 GDF6Q6KF10 455 aaPredicted RBP18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 CUL5Q93034 780 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 EMID1Q96A84 441 aaPredicted RBP18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
CHCHD3-204ENST00000457942 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 RXRAP19793 462 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 MFSD10Q14728 455 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 GNPTABQ3T906 1256 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 VSIG10LQ86VR7 867 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 TMTC2Q8N394 836 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 SMARCC2Q8TAQ2 1214 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 KAT2BQ92831 832 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 LZTS2Q9BRK4 669 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 SPZ1Q9BXG8 430 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 UBE2ZQ9H832 354 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 MUC6Q6W4X9 2439 aa18.17■□□□□ 0.5
CHCHD3-204ENST00000457942 RGS20O76081 388 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 UBA1P22314 1058 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 KCNA5P22460 613 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 GNAQP50148 359 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms