RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 CD2APQ9Y5K6 639 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 MRFAP1Q9Y605 127 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 SIPA1L1O43166 1804 aa7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 DICER1Q9UPY3 1922 aaKnown RBP7.55□□□□□ -1.2
CUBNP3-201ENST00000457461 GOLGA6L7A0A1B0GV03 622 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 WDR46O15213 610 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 PRC1O43663 620 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ECE2O60344 883 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 BAG3O95817 575 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 VIMP08670 466 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 PLCG2P16885 1265 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ARPC4P59998 168 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 BLMHQ13867 455 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 INAQ16352 499 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CMPK2Q5EBM0 449 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 THEMIS2Q5TEJ8 643 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CYB5R4Q7L1T6 521 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 RALYLQ86SE5 291 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SGMS1Q86VZ5 419 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 PPP1R14CQ8TAE6 165 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 P3H4Q92791 437 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 BRF1Q92994 677 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CGREF1Q99674 301 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 KRT23Q9C075 422 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 IFT122Q9HBG6 1241 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SLC39A2Q9NP94 309 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ZNHIT6Q9NWK9 470 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 COMMD8Q9NX08 183 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 IL20Q9NYY1 176 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 NRBP1Q9UHY1 535 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ZDHHC9Q9Y397 364 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 GREB1LQ9C091 1923 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 MYH6P13533 1939 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 EIF3FO00303 357 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 MEFVO15553 781 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ORC4O43929 436 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 STAM2O75886 525 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 KIAA0754O94854 1291 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SYT1P21579 422 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 LIFRP42702 1097 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 BTDP43251 543 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CTAG1AP78358 180 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 RIPK1Q13546 671 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 PKP1Q13835 747 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 RCN1Q15293 331 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 FXNQ16595 210 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 DOK7Q18PE1 504 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ARMC3Q5W041 872 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SARM1Q6SZW1 724 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 HHIPL2Q6UWX4 724 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 MFSD6Q6ZSS7 791 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 BZW1Q7L1Q6 419 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 TTC39CQ8N584 583 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SMARCC2Q8TAQ2 1214 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 IGDCC4Q8TDY8 1250 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SH3RF3Q8TEJ3 882 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 SMC6Q96SB8 1091 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 LRRC2Q9BYS8 371 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 VCPKMTQ9H867 229 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 DBNDD1Q9H9R9 158 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 C6orf203Q9P0P8 240 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 PIM2Q9P1W9 311 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 FBXO9Q9UK97 447 aaPredicted RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 RAB21Q9UL25 225 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 TRPC6Q9Y210 931 aa7.54□□□□□ -1.2
CUBNP3-201ENST00000457461 TRIM64CA6NLI5 447 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 YDJCA8MPS7 323 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 B4E1Z4 1266 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 USP17L21D6R901 530 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 SMIM22K7EJ46 135 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 CYTH3O43739 400 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 PTGS1P23219 599 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 PDIA3P30101 505 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 ABL2P42684 1182 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 GSDMDP57764 484 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 NLRP5P59047 1200 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 ACTN3Q08043 901 aaPredicted RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 BYSLQ13895 437 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 LBRQ14739 615 aaKnown RBP7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 AOC3Q16853 763 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 SGSM1Q2NKQ1 1148 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC14Q49A88 953 aa7.53□□□□□ -1.2
CUBNP3-201ENST00000457461 CCDC40Q4G0X9 1142 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms