RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PLBD2Q8NHP8 589 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SUCLG2Q96I99 432 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 CCDC85AQ96PX6 553 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 KIFC3Q9BVG8 833 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ROPN1BQ9BZX4 212 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 C10orf88Q9H8K7 445 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ROPN1Q9HAT0 212 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 BCORL1Q5H9F3 1711 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 O00370 1275 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MCF2LO15068 1137 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 TTC4O95801 387 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 KCNA3P22001 575 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 LIFRP42702 1097 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SNX16P57768 344 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 RCN2Q14257 317 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PPP4R3CPQ6ZMV5 832 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 BLIDQ8IZY5 108 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 CCDC89Q8N998 374 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PRPF38AQ8NAV1 312 aaKnown RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 VAT1LQ9HCJ6 419 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ANAPC5Q9UJX4 755 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 TRPM2O94759 1503 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 KIAA0556O60303 1618 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ANP32DO95626 131 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 OR52Z1P0C646 297 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PYGBP11216 843 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SCP2P22307 547 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MED21Q13503 144 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 TOB2Q14106 344 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 GCKRQ14397 625 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 EXOC3L4Q17RC7 722 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PROM2Q8N271 834 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MAGEB6Q8N7X4 407 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 TC2NQ8N9U0 490 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 ZBTB10Q96DT7 871 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 PLIN2Q99541 437 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 XAB2Q9HCS7 855 aaKnown RBP5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 SAMD9LQ8IVG5 1584 aa5.42□□□□□ -1.54
PCDH9-203ENST00000456367 MAN1A2O60476 641 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CCDC22O60826 627 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 HLA-DOAP06340 250 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CHRNA3P32297 505 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ADD1P35611 737 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 GJC1P36383 396 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TNNI2P48788 182 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TMED10P49755 219 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ROR2Q01974 943 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ASPHQ12797 758 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SF3A3Q12874 501 aaKnown RBP eCLIP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PTGDRQ13258 359 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 NR1I3Q14994 352 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CALCRLQ16602 461 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 C16orf87Q6PH81 154 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 APOA5Q6Q788 366 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ARHGAP27Q6ZUM4 889 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ANKRD13CQ8N6S4 541 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ICA1LQ8NDH6 482 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CAVIN3Q969G5 261 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TEKT1Q969V4 418 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SDCCAG3Q96C92 435 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 EPSTI1Q96J88 318 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 EYA1Q99502 592 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 NDST4Q9H3R1 872 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CEP72Q9P209 647 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 DNM3Q9UQ16 869 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 LAMC1P11047 1609 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 H3BQF6 201 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CCNT1O60563 726 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 NQO1P15559 274 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 EEF1DP29692 281 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SCTRP47872 440 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 DNAL1Q4LDG9 190 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 MMS19Q96T76 1030 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ZBTB3Q9H5J0 574 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CCDC87Q9NVE4 849 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 RAB20Q9NX57 234 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TMOD3Q9NYL9 352 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 LCMT1Q9UIC8 334 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 YTHDC2Q9H6S0 1430 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 NLRP1Q9C000 1473 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ATP1A1P05023 1023 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 INHBAP08476 426 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 HSPA8P11142 646 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 GNAT1P11488 350 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 COPS2P61201 443 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 UBE3CQ15386 1083 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 GRAMD1BQ3KR37 738 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 FAM26FQ5R3K3 315 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SESTD1Q86VW0 696 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PAF1Q8N7H5 531 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 DDI1Q8WTU0 396 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 STAMQ92783 540 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 XAGE2Q96GT9 111 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 DYDC2Q96IM9 177 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PHF8Q9UPP1 1060 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms