RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HDLBPQ00341 1268 aaKnown RBP8.44□□□□□ -1.06
HDAC9-218ENST00000456174 TBX2Q13207 712 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-218ENST00000456174 XRCC4Q13426 336 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 E2F5Q15329 346 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 PKN1Q16512 942 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 ANO1Q5XXA6 986 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 SRBD1Q8N5C6 995 aaKnown RBP8.44□□□□□ -1.06
HDAC9-218ENST00000456174 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 DTNBP1Q96EV8 351 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 STX8Q9UNK0 236 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 C15orf41Q9Y2V0 281 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 CNTNAP5Q8WYK1 1306 aa8.44□□□□□ -1.06
HDAC9-218ENST00000456174 TARSL2A2RTX5 802 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 SPTLC2O15270 562 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 ZBTB7AO95365 584 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 LINGO3P0C6S8 592 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 XBP1P17861 261 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 IBSPP21815 317 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 BLMHQ13867 455 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 ACCSLQ4AC99 568 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 NAA35Q5VZE5 725 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 NOSTRINQ8IVI9 506 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 DIS3L2Q8IYB7 885 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 GALNT15Q8N3T1 639 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 KCNG4Q8TDN1 519 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 NSMCE1Q8WV22 266 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 RIN2Q8WYP3 895 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 SCLT1Q96NL6 688 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 MAP3K14Q99558 947 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 TMEM47Q9BQJ4 181 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 IQCGQ9H095 443 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 GOLPH3LQ9H4A5 285 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 PAPOLBQ9NRJ5 636 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 PCDHAC2Q9Y5I4 1007 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 YDJCA8MPS7 323 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 USP14P54578 494 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 GABPAQ06546 454 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 NFIAQ12857 509 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 CDC37Q16543 378 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC38Q502W7 563 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 EMC10Q5UCC4 262 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 ADALQ6DHV7 355 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 TOGARAM2Q6ZUX3 1019 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 RBM41Q96IZ5 413 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC114Q96M63 670 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 YIPF3Q9GZM5 350 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 EPN3Q9H201 632 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 FOXP1Q9H334 677 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 SERPINB13Q9UIV8 391 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 HOOK1Q9UJC3 728 aaKnown RBP8.43□□□□□ -1.06
HDAC9-218ENST00000456174 SERPINA10Q9UK55 444 aa8.43□□□□□ -1.06
HDAC9-218ENST00000456174 SIPA1L1O43166 1804 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 BRCA1P38398 1863 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 GRM4Q14833 912 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 SLC39A14Q15043 492 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 ZNF473Q8WTR7 871 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 SHISA4Q96DD7 197 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 CEP95Q96GE4 821 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 NUP58Q9BVL2 599 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 RMI1Q9H9A7 625 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 SUN2Q9UH99 717 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 MYH4Q9Y623 1939 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 HLA-DOAP06340 250 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 GNAQP50148 359 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 CACNB3P54284 484 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 TGFB2P61812 414 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 ZBED6P86452 979 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 NR5A1Q13285 461 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 LACTB2Q53H82 288 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 RNF187Q5TA31 235 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 FSIP1Q8NA03 581 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 NOA1Q8NC60 698 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 MIPOL1Q8TD10 442 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 BICD1Q96G01 975 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 PHF20Q9BVI0 1012 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 HSD3B7Q9H2F3 369 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 MMADHCQ9H3L0 296 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 MRPL44Q9H9J2 332 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 SWAP70Q9UH65 585 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 G3BP2Q9UN86 482 aaKnown RBP8.42□□□□□ -1.06
HDAC9-218ENST00000456174 PLIN4Q96Q06 1357 aa8.42□□□□□ -1.06
HDAC9-218ENST00000456174 A0A087WWV3 80 aa8.41□□□□□ -1.06
HDAC9-218ENST00000456174 A0A1W2PQ27 194 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms