RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 KLHL6Q8WZ60 621 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 DTLQ9NZJ0 730 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 ZDHHC9Q9Y397 364 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 TIMM13Q9Y5L4 95 aaPredicted RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 X6R8D5 127 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 WDR33Q9C0J8 1336 aaKnown RBP3.98□□□□□ -1.77
LINC02540-201ENST00000455554 ANKRD34BA5PLL1 514 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 ZNF76P36508 570 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 INHBEP58166 350 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 ABHD18Q0P651 414 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 COL9A2Q14055 689 aaPredicted RBP3.98□□□□□ -1.77
LINC02540-201ENST00000455554 PRKD1Q15139 912 aaPredicted RBP3.98□□□□□ -1.77
LINC02540-201ENST00000455554 CHRNA2Q15822 529 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 MIIPQ5JXC2 388 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 IQCEQ6IPM2 695 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 POMZP3Q6PJE2 187 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 TEPPQ6URK8 271 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 RNF207Q6ZRF8 634 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 ZNF513Q8N8E2 541 aaPredicted RBP3.98□□□□□ -1.77
LINC02540-201ENST00000455554 CHFRQ96EP1 664 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 TRMT2BQ96GJ1 504 aaKnown RBP3.98□□□□□ -1.77
LINC02540-201ENST00000455554 BCL2L13Q9BXK5 485 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 APEX2Q9UBZ4 518 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 ADAM29Q9UKF5 820 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 EMC9Q9Y3B6 208 aa3.98□□□□□ -1.77
LINC02540-201ENST00000455554 HGSO14964 777 aaPredicted RBP3.97□□□□□ -1.77
LINC02540-201ENST00000455554 GTF2A2P52657 109 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 EIF6P56537 245 aaKnown RBP3.97□□□□□ -1.77
LINC02540-201ENST00000455554 CYP4F3Q08477 520 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 LDLRAD1Q5T700 205 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 RALYLQ86SE5 291 aaKnown RBP3.97□□□□□ -1.77
LINC02540-201ENST00000455554 NLRP10Q86W26 655 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 ARRDC4Q8NCT1 418 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 BVESQ8NE79 360 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 OR6P1Q8NGX9 317 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 GIPC2Q8TF65 315 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 FRS2Q8WU20 508 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 ZNF503Q96F45 646 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 TMEM169Q96HH4 297 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 SEC61A2Q9H9S3 476 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 CYP26B1Q9NR63 512 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 COA3Q9Y2R0 106 aaPredicted RBP3.97□□□□□ -1.77
LINC02540-201ENST00000455554 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 PCDHGB7Q9Y5F8 929 aa3.97□□□□□ -1.77
LINC02540-201ENST00000455554 TCRBV5S2A0A599 114 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 ARNTLO00327 626 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 NOP56O00567 594 aaKnown RBP3.96□□□□□ -1.78
LINC02540-201ENST00000455554 FOXS1O43638 330 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 MYO1BO43795 1136 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 ZNF202O95125 648 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 CNOT4O95628 575 aaKnown RBP3.96□□□□□ -1.78
LINC02540-201ENST00000455554 LRG1P02750 347 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 BCL6P41182 706 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 GIPRP48546 466 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 CCDC27Q2M243 656 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 NRN1LQ496H8 165 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 ZNF394Q53GI3 561 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 STEAP3Q658P3 488 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 GTF2IRD2BQ6EKJ0 949 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 TCTN3Q6NUS6 607 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 KIAA1211LQ6NV74 962 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 TMC5Q6UXY8 1006 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 GTF2IRD2Q86UP8 949 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 ZNF575Q86XF7 245 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 NPLOC4Q8TAT6 608 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 GNRHR2Q96P88 292 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 ADOQ96SZ5 270 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 LGR4Q9BXB1 951 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 GINM1Q9NU53 330 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 RBPJLQ9UBG7 517 aa3.96□□□□□ -1.78
LINC02540-201ENST00000455554 TADA3O75528 432 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 COL6A1P12109 1028 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 DGCR2P98153 550 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 PPP2R5EQ16537 467 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 PHF19Q5T6S3 580 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 E4F1Q66K89 784 aaPredicted RBP3.95□□□□□ -1.78
LINC02540-201ENST00000455554 TRIM59Q8IWR1 403 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 AMER2Q8N7J2 671 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 NUDT10Q8NFP7 164 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 DIO2Q92813 273 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 NUDT11Q96G61 164 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 LMF1Q96S06 567 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 CEP89Q96ST8 783 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 APBA2Q99767 749 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 CSRNP2Q9H175 543 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 NKX2-4Q9H2Z4 354 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 FBXL7Q9UJT9 491 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 SLC4A7Q9Y6M7 1214 aa3.95□□□□□ -1.78
LINC02540-201ENST00000455554 PLSCR1O15162 318 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 KLHL18O94889 574 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 NAT2P11245 290 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 SOX9P48436 509 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 FANCCQ00597 558 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 DPTQ07507 201 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 KCNAB2Q13303 367 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 USP39Q53GS9 565 aaKnown RBP3.94□□□□□ -1.78
LINC02540-201ENST00000455554 EMC4Q5J8M3 183 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 VHLLQ6RSH7 139 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 Q6ZUG5 572 aa3.94□□□□□ -1.78
LINC02540-201ENST00000455554 CCDC103Q8IW40 242 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms