RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 PSEN2P49810 448 aa18.95■□□□□ 0.62
NCKIPSD-208ENST00000454134 DEFB128Q7Z7B8 93 aa18.95■□□□□ 0.62
NCKIPSD-208ENST00000454134 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
NCKIPSD-208ENST00000454134 PSTPIP2Q9H939 334 aa18.95■□□□□ 0.62
NCKIPSD-208ENST00000454134 PIK3CDO00329 1044 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 ZBTB43O43298 467 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 F2P00734 622 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 TGFB3P10600 412 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 SEMA3FQ13275 785 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 KRT32Q14532 448 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 MFSD10Q14728 455 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 UBE2SQ16763 222 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 HEATR3Q7Z4Q2 680 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 SESTD1Q86VW0 696 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 RPUSD2Q8IZ73 545 aaKnown RBP18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 SLC17A8Q8NDX2 589 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 INPP4AQ96PE3 977 aaPredicted RBP18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 MLXIPQ9HAP2 919 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 HDAC6Q9UBN7 1215 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 SCN5AQ14524 2016 aa18.94■□□□□ 0.62
NCKIPSD-208ENST00000454134 KLF18A0A0U1RQI7 1052 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 SPATA31C2B4DYI2 1134 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 NEFLP07196 543 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 IQCF3P0C7M6 154 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 HOXD8P13378 290 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 RTN1Q16799 776 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 KIAA0753Q2KHM9 967 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 GNPTABQ3T906 1256 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 C7orf31Q8N865 590 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 RETREG2Q8NC44 543 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 MYLIPQ8WY64 445 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 KATNAL1Q9BW62 490 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 PBX4Q9BYU1 374 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 MTIF3Q9H2K0 278 aaKnown RBP18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 NAP1L2Q9ULW6 460 aaPredicted RBP18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
NCKIPSD-208ENST00000454134 RBAK-RBAKDNI3L0D1 243 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 HAS3O00219 553 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 PITPNM1O00562 1244 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 PPFIA4O75335 1185 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 STAM2O75886 525 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 ICAM3P32942 547 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 BFSP2Q13515 415 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 PCNX4Q63HM2 1172 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 JAKMIP1Q96N16 626 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 RBM28Q9NW13 759 aaKnown RBP18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 TELO2Q9Y4R8 837 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 SNX14Q9Y5W7 946 aa18.92■□□□□ 0.62
NCKIPSD-208ENST00000454134 DOCK5Q9H7D0 1870 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 GOLGA8AA7E2F4 631 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 GOLGA8BA8MQT2 603 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 ZBBXA8MT70 800 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 FIBPO43427 364 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 HSPA4P34932 840 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 FGD1P98174 961 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 ZNF200P98182 395 aaPredicted RBP18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 FUT2Q10981 343 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 WWC2Q6AWC2 1192 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 CYFIP1Q7L576 1253 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 KCNB2Q92953 911 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 C16orf70Q9BSU1 422 aa18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 FAM217BQ9NTX9 383 aaPredicted RBP18.91■□□□□ 0.62
NCKIPSD-208ENST00000454134 TANC1Q9C0D5 1861 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 TMEM265A0A087WTH1 108 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 NOP56O00567 594 aaKnown RBP18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 HMGB1P09429 215 aaKnown RBP18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 CDC27P30260 824 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 SP4Q02446 784 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 APOBRQ0VD83 1088 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 HIC1Q14526 733 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 GRIN2CQ14957 1233 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 TYW1BQ6NUM6 668 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 ZNF576Q9H609 170 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 SLC4A7Q9Y6M7 1214 aa18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 V9GY48 417 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 TRIP12Q14669 1992 aaPredicted RBP18.9■□□□□ 0.62
NCKIPSD-208ENST00000454134 LGALS2P05162 132 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 PFKMP08237 780 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 RFC2P35250 354 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 RABGGTBP53611 331 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 NEDD9Q14511 834 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 METTL7BQ6UX53 244 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 Q6ZUG5 572 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 CCDC155Q8N6L0 562 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 WNT8BQ93098 351 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 FTOQ9C0B1 505 aaKnown RBP eCLIP18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 PCDHA6Q9UN73 950 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 PCDHA8Q9Y5H6 950 aa18.89■□□□□ 0.61
NCKIPSD-208ENST00000454134 SPDYE3A6NKU9 549 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 H3BRB1 525 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 ITGB5P18084 799 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 NAPAP54920 295 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 LRRC8DQ7L1W4 858 aa18.88■□□□□ 0.61
NCKIPSD-208ENST00000454134 NLRX1Q86UT6 975 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms