RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
LINC00339-205ENST00000452322 DDX20Q9UHI6 824 aaKnown RBP13.52□□□□□ -0.25
LINC00339-205ENST00000452322 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
LINC00339-205ENST00000452322 MRVI1Q9Y6F6 885 aa13.52□□□□□ -0.25
LINC00339-205ENST00000452322 SPATA31C2B4DYI2 1134 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 NKRFO15226 690 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00339-205ENST00000452322 ARIH2O95376 493 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 TDP2O95551 362 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 TXNP10599 105 aaKnown RBP13.51□□□□□ -0.25
LINC00339-205ENST00000452322 CCL5P13501 91 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 TNFAIP2Q03169 654 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 Q4G0T1 1027 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 DUSP28Q4G0W2 176 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 LENG9Q96B70 501 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
LINC00339-205ENST00000452322 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
LINC00339-205ENST00000452322 DDX41Q9UJV9 622 aaKnown RBP13.51□□□□□ -0.25
LINC00339-205ENST00000452322 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 ADCY6O43306 1168 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 ZSCAN22P10073 491 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 RARBP10826 455 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 SMPD1P17405 629 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 RESTQ13127 1097 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 ORC2Q13416 577 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 PRR16Q569H4 304 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 RILPL1Q5EBL4 403 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 GNEQ9Y223 722 aaKnown RBP13.5□□□□□ -0.25
LINC00339-205ENST00000452322 Q9Y3F1 56 aa13.5□□□□□ -0.25
LINC00339-205ENST00000452322 MYCP01106 439 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-205ENST00000452322 ARP10275 920 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
LINC00339-205ENST00000452322 DDIT3P35638 169 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
LINC00339-205ENST00000452322 PKP1Q13835 747 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 NEDD9Q14511 834 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 LY6KQ17RY6 165 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-205ENST00000452322 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
LINC00339-205ENST00000452322 WNT7AO00755 349 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 SLC37A4O43826 429 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 ATP9AO75110 1047 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 BRD1O95696 1058 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 F13A1P00488 732 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 GJB1P08034 283 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 KCNA2P16389 499 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-205ENST00000452322 SP2Q02086 613 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 TMEM63BQ5T3F8 832 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 LHX8Q68G74 356 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 TLK2Q86UE8 772 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-205ENST00000452322 LENG1Q96BZ8 264 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-205ENST00000452322 IPO9Q96P70 1041 aaKnown RBP13.48□□□□□ -0.25
LINC00339-205ENST00000452322 DEFB118Q96PH6 123 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
LINC00339-205ENST00000452322 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
LINC00339-205ENST00000452322 NFASCO94856 1347 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 IPO5O00410 1097 aaKnown RBP13.47□□□□□ -0.25
LINC00339-205ENST00000452322 TBX3O15119 743 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 MSH4O15457 936 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 NEMFO60524 1076 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 GGPS1O95749 300 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 GH1P01241 217 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 GJA9P57773 515 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 NKX3-2P78367 333 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 ARHGAP1Q07960 439 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 CELF3Q5SZQ8 465 aaKnown RBP13.47□□□□□ -0.25
LINC00339-205ENST00000452322 GJC2Q5T442 439 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-205ENST00000452322 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 OR6J1Q8NGC5 347 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 COPS5Q92905 334 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 UPF3AQ9H1J1 476 aaKnown RBP13.47□□□□□ -0.25
LINC00339-205ENST00000452322 KCNMB3Q9NPA1 279 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 XPNPEP3Q9NQH7 507 aa13.47□□□□□ -0.25
LINC00339-205ENST00000452322 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 FARP2O94887 1054 aaPredicted RBP13.46□□□□□ -0.25
LINC00339-205ENST00000452322 SGPL1O95470 568 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 CAPN2P17655 700 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 MCM7P33993 719 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 GJA8P48165 433 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 NUCB2P80303 420 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
LINC00339-205ENST00000452322 LAMC2Q13753 1193 aa13.46□□□□□ -0.25
LINC00339-205ENST00000452322 NBR1Q14596 966 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms