RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
MSH5-209ENST00000450148 GTF2IRD1Q9UHL9 959 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
MSH5-209ENST00000450148 CNTNAP5Q8WYK1 1306 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 IQCF3P0C7M6 154 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 ZNF286BP0CG31 522 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 PSEN2P49810 448 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 FUT2Q10981 343 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 HIC1Q14526 733 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 GPNMBQ14956 572 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
MSH5-209ENST00000450148 OTOP2Q7RTS6 562 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 SLC17A8Q8NDX2 589 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 C16orf70Q9BSU1 422 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
MSH5-209ENST00000450148 SPATA31C2B4DYI2 1134 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 SORBS3O60504 671 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 PPFIA4O75335 1185 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 STAM2O75886 525 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 RBL2Q08999 1139 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 MFSD10Q14728 455 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 GRIN2CQ14957 1233 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 PTGISQ16647 500 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
MSH5-209ENST00000450148 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 MYLIPQ8WY64 445 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 TIFAQ96CG3 184 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 FAM217BQ9NTX9 383 aaPredicted RBP14.25□□□□□ -0.13
MSH5-209ENST00000450148 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 SEC63Q9UGP8 760 aaKnown RBP14.25□□□□□ -0.13
MSH5-209ENST00000450148 TELO2Q9Y4R8 837 aa14.25□□□□□ -0.13
MSH5-209ENST00000450148 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 PFKMP08237 780 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 CHMP4BP1P59074 171 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 KIAA0753Q2KHM9 967 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 WNT8BQ93098 351 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 SPATA33Q96N06 139 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 ALG1Q9BT22 464 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
MSH5-209ENST00000450148 YBX2Q9Y2T7 364 aaKnown RBP14.24□□□□□ -0.13
MSH5-209ENST00000450148 RBAK-RBAKDNI3L0D1 243 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 FIBPO43427 364 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 CPA1P15085 419 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 HOXC8P31273 242 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 HSPA4P34932 840 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 RFC2P35250 354 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
MSH5-209ENST00000450148 BFSP2Q13515 415 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
MSH5-209ENST00000450148 GNPTABQ3T906 1256 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 XRRA1Q6P2D8 792 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 TRAF7Q6Q0C0 670 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 CUL5Q93034 780 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
MSH5-209ENST00000450148 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 MLXIPQ9HAP2 919 aa14.23□□□□□ -0.13
MSH5-209ENST00000450148 LGALS2P05162 132 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 CDC27P30260 824 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 NEDD9Q14511 834 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 KRT32Q14532 448 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 UBE2SQ16763 222 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 METTL7BQ6UX53 244 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 RETREG2Q8NC44 543 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 GPR20Q99678 358 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 SENP7Q9BQF6 1050 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 RBM28Q9NW13 759 aaKnown RBP14.22□□□□□ -0.13
MSH5-209ENST00000450148 NOD1Q9Y239 953 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 CDH23Q9H251 3354 aa14.22□□□□□ -0.13
MSH5-209ENST00000450148 ZBTB43O43298 467 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 ATP9AO75110 1047 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 CKBP12277 381 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 SELPP16109 830 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 ITGB5P18084 799 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 RABGGTBP53611 331 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 RCAN1P53805 252 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 PTK7Q13308 1070 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 RAB30Q15771 203 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 RTN1Q16799 776 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 SYNE3Q6ZMZ3 975 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 C7orf31Q8N865 590 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 NKX2-4Q9H2Z4 354 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 PCDHA6Q9UN73 950 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 PCDHA8Q9Y5H6 950 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 UBIAD1Q9Y5Z9 338 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms