RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ROBO1Q9Y6N7 1651 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 PPP4CP60510 307 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 CDK17Q00537 523 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 GRAPQ13588 217 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
SYVN1-204ENST00000449943 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
SYVN1-204ENST00000449943 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 AGPSO00116 658 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 GPSM2P81274 684 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 STK17AQ9UEE5 414 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
SYVN1-204ENST00000449943 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 MTMR9Q96QG7 549 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 RUFY1Q96T51 708 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
SYVN1-204ENST00000449943 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
SYVN1-204ENST00000449943 MTMR8Q96EF0 704 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 LSM14BQ9BX40 385 aaKnown RBP12.51□□□□□ -0.41
SYVN1-204ENST00000449943 PDHBP11177 359 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 SLC16A2P36021 539 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 POLR2FP61218 127 aaKnown RBP12.51□□□□□ -0.41
SYVN1-204ENST00000449943 ECM1Q16610 540 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 PDXDC1Q6P996 788 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
SYVN1-204ENST00000449943 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
SYVN1-204ENST00000449943 FTCDO95954 541 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 AENQ8WTP8 325 aaKnown RBP12.5□□□□□ -0.41
SYVN1-204ENST00000449943 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 CD209Q9NNX6 404 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 RBM12Q9NTZ6 932 aaKnown RBP12.5□□□□□ -0.41
SYVN1-204ENST00000449943 HDAC9Q9UKV0 1011 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 NPHP3-ACAD11A0A0J9YXS1 232 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 TCP1P17987 556 aaKnown RBP12.5□□□□□ -0.41
SYVN1-204ENST00000449943 MMGT1Q8N4V1 131 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 BAP1Q92560 729 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 CUL5Q93034 780 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 EHD4Q9H223 541 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
SYVN1-204ENST00000449943 ESYT3A0FGR9 886 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 RAPGEF1Q13905 1077 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 PTPROQ16827 1216 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
SYVN1-204ENST00000449943 RREB1Q92766 1687 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 LRRC63Q05C16 580 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 COASYQ13057 564 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 POLD4Q9HCU8 107 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
SYVN1-204ENST00000449943 AKR1B1P15121 316 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYVN1-204ENST00000449943 HAUS3Q68CZ6 603 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
SYVN1-204ENST00000449943 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 STIM2Q9P246 746 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 E9PMD0 336 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 KCNMA1Q12791 1236 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 TRAF1Q13077 416 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
SYVN1-204ENST00000449943 TLR10Q9BXR5 811 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 GPR75-ASB3A0A0A6YYF3 556 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
SYVN1-204ENST00000449943 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 PALMO75781 387 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 STK32BQ9NY57 414 aa12.49□□□□□ -0.41
SYVN1-204ENST00000449943 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 TBC1D5Q92609 795 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 HSF2BPO75031 334 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 CCT5P48643 541 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 PPARDQ03181 441 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 KCTD19Q17RG1 926 aaPredicted RBP12.48□□□□□ -0.41
SYVN1-204ENST00000449943 KLHDC7AQ5VTJ3 777 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYVN1-204ENST00000449943 NT5C2P49902 561 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 RHBDL3P58872 404 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 FKBP3Q00688 224 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms