RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 ZNF286BP0CG31 522 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 MYOGP15173 224 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 SMARCA1P28370 1054 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 GNAQP50148 359 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 MFSD10Q14728 455 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 NECTIN1Q15223 517 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 HSDL1Q3SXM5 330 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 CREB3L3Q68CJ9 461 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 GPKOWQ92917 476 aaPredicted RBP eCLIP15.83■□□□□ 0.12
TOM1-211ENST00000449508 COL25A1Q9BXS0 654 aaPredicted RBP15.83■□□□□ 0.12
TOM1-211ENST00000449508 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
TOM1-211ENST00000449508 GTF2IRD1Q9UHL9 959 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
TOM1-211ENST00000449508 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 HAS3O00219 553 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 SH2B2O14492 632 aaPredicted RBP15.82■□□□□ 0.12
TOM1-211ENST00000449508 F2P00734 622 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 RXRAP19793 462 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 UBA1P22314 1058 aaKnown RBP15.82■□□□□ 0.12
TOM1-211ENST00000449508 PPP2R2DQ66LE6 453 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 CMTR1Q8N1G2 835 aaKnown RBP15.82■□□□□ 0.12
TOM1-211ENST00000449508 SMARCC2Q8TAQ2 1214 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 PPM1EQ8WY54 764 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 CUL5Q93034 780 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 CTAGE1Q96RT6 745 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
TOM1-211ENST00000449508 EYSQ5T1H1 3165 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 STAM2O75886 525 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 PLEKHA8P1O95397 391 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 CALM1P0DP23 149 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 CALM2P0DP24 149 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 CALM3P0DP25 149 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 SELPP16109 830 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 IGFBP4P22692 258 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 LIFRP42702 1097 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 MRPS9P82933 396 aaKnown RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 COL9A3Q14050 684 aaPredicted RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 GNPTABQ3T906 1256 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 CENPQQ7L2Z9 268 aaPredicted RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 SKAP1Q86WV1 359 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 DHX38Q92620 1227 aaKnown RBP15.81■□□□□ 0.12
TOM1-211ENST00000449508 LRRC2Q9BYS8 371 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 BCAS3Q9H6U6 928 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
TOM1-211ENST00000449508 CKBP12277 381 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 ZNF200P98182 395 aaPredicted RBP15.8■□□□□ 0.12
TOM1-211ENST00000449508 PTK7Q13308 1070 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 BMP2KLQ5H9B9 411 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 LRRC8DQ7L1W4 858 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 RAB11FIP4Q86YS3 637 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 CCDC82Q8N4S0 544 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 PHOSPHO2Q8TCD6 241 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 SLC9A7Q96T83 725 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 PRUNE2Q8WUY3 3088 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 DOCK5Q9H7D0 1870 aa15.8■□□□□ 0.12
TOM1-211ENST00000449508 FRMPD4Q14CM0 1322 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 SPATA31C2B4DYI2 1134 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 H3BRB1 525 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
TOM1-211ENST00000449508 MEIS2O14770 477 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 BAIAP3O94812 1187 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 PARNO95453 639 aaKnown RBP15.79■□□□□ 0.12
TOM1-211ENST00000449508 ICAM3P32942 547 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 ADGRE1Q14246 886 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 NEDD9Q14511 834 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 GPNMBQ14956 572 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 CYFIP1Q7L576 1253 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 INPP4AQ96PE3 977 aaPredicted RBP15.79■□□□□ 0.12
TOM1-211ENST00000449508 C16orf70Q9BSU1 422 aa15.79■□□□□ 0.12
TOM1-211ENST00000449508 TUT1Q9H6E5 874 aaKnown RBP15.79■□□□□ 0.12
TOM1-211ENST00000449508 hCG_1642624A0A1W2PR95 340 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 PIK3CDO00329 1044 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 FIBPO43427 364 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 CA3P07451 260 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 KCNJ6P48051 423 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 RBL2Q08999 1139 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
TOM1-211ENST00000449508 PCNX4Q63HM2 1172 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 HERC6Q8IVU3 1022 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 NEK1Q96PY6 1258 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
TOM1-211ENST00000449508 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 NBNO60934 754 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 LGALS2P05162 132 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 SEMA3FQ13275 785 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 HIC1Q14526 733 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 ZNF618Q5T7W0 954 aa15.77■□□□□ 0.12
TOM1-211ENST00000449508 CNKSR3Q6P9H4 555 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms