RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 BAZ2BQ9UIF8 2168 aaKnown RBP12.48□□□□□ -0.41
SRRT-205ENST00000449389 HAS3O00219 553 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 ZNF286BP0CG31 522 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 CALM1P0DP23 149 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 CALM2P0DP24 149 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 CALM3P0DP25 149 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
SRRT-205ENST00000449389 RBL2Q08999 1139 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 NECTIN1Q15223 517 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 CUL5Q93034 780 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 ALG1Q9BT22 464 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
SRRT-205ENST00000449389 PRDM12Q9H4Q4 367 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 MLXIPQ9HAP2 919 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
SRRT-205ENST00000449389 PRUNE2Q8WUY3 3088 aa12.48□□□□□ -0.41
SRRT-205ENST00000449389 TANC1Q9C0D5 1861 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 BAIAP3O94812 1187 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 PARNO95453 639 aaKnown RBP12.47□□□□□ -0.41
SRRT-205ENST00000449389 SELPP16109 830 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 ICAM3P32942 547 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 SP2Q02086 613 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 HSDL1Q3SXM5 330 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 LRRC8DQ7L1W4 858 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 SMARCC2Q8TAQ2 1214 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 PHOSPHO2Q8TCD6 241 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
SRRT-205ENST00000449389 SLC9A7Q96T83 725 aa12.47□□□□□ -0.41
SRRT-205ENST00000449389 FIBPO43427 364 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 SORBS3O60504 671 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 RABGGTBP53611 331 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
SRRT-205ENST00000449389 PTK7Q13308 1070 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 NEDD9Q14511 834 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 PPP2R2DQ66LE6 453 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
SRRT-205ENST00000449389 DHX38Q92620 1227 aaKnown RBP12.46□□□□□ -0.41
SRRT-205ENST00000449389 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
SRRT-205ENST00000449389 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
SRRT-205ENST00000449389 COL25A1Q9BXS0 654 aaPredicted RBP12.46□□□□□ -0.41
SRRT-205ENST00000449389 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
SRRT-205ENST00000449389 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.42
SRRT-205ENST00000449389 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
SRRT-205ENST00000449389 MEIS2O14770 477 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 CKBP12277 381 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 RXRAP19793 462 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 KCNJ6P48051 423 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 PCNX4Q63HM2 1172 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 SGMS1Q86VZ5 419 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 C16orf70Q9BSU1 422 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 SCN5AQ14524 2016 aa12.45□□□□□ -0.42
SRRT-205ENST00000449389 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 H3BRB1 525 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 CDC45O75419 566 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 CXCL10P02778 98 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 LGALS2P05162 132 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 MYOGP15173 224 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
SRRT-205ENST00000449389 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
SRRT-205ENST00000449389 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 SYNE3Q6ZMZ3 975 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 TMTC3Q6ZXV5 915 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 NLRX1Q86UT6 975 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 NEK1Q96PY6 1258 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 USP26Q9BXU7 913 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 TUT1Q9H6E5 874 aaKnown RBP12.44□□□□□ -0.42
SRRT-205ENST00000449389 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
SRRT-205ENST00000449389 C17orf102A2RUQ5 167 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 NBNO60934 754 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 EFCAB14O75071 495 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 CA3P07451 260 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 IGFBP4P22692 258 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 GPNMBQ14956 572 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
SRRT-205ENST00000449389 CMTR1Q8N1G2 835 aaKnown RBP12.43□□□□□ -0.42
SRRT-205ENST00000449389 GIMAP8Q8ND71 665 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms