RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 MEIS1O00470 390 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 ATP9AO75110 1047 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 CYP3A7P24462 503 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 CNGA1P29973 690 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 MTMR1Q13613 665 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 LY6KQ17RY6 165 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 GJC2Q5T442 439 aaPredicted RBP13.47□□□□□ -0.25
RCL1-208ENST00000448872 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 PLA2G4DQ86XP0 818 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 COPS5Q92905 334 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 MBOAT7Q96N66 472 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
RCL1-208ENST00000448872 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
RCL1-208ENST00000448872 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 SMPD1P17405 629 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 CEBPZQ03701 1054 aaKnown RBP13.46□□□□□ -0.25
RCL1-208ENST00000448872 MTFR1Q15390 333 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
RCL1-208ENST00000448872 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 MCOLN1Q9GZU1 580 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 TMEM60Q9H2L4 133 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
RCL1-208ENST00000448872 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
RCL1-208ENST00000448872 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
RCL1-208ENST00000448872 BRCA2P51587 3418 aa13.46□□□□□ -0.26
RCL1-208ENST00000448872 LCTP09848 1927 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 MSH4O15457 936 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 FIBPO43427 364 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 STAM2O75886 525 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 TXNP10599 105 aaKnown RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 NUCB2P80303 420 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 ITGB3BPQ13352 177 aaPredicted RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 GNPTABQ3T906 1256 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 Q4G0T1 1027 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 GPRASP2Q96D09 838 aa13.45□□□□□ -0.26
RCL1-208ENST00000448872 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
RCL1-208ENST00000448872 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 NEMFO60524 1076 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 KCNA2P16389 499 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 UBA1P22314 1058 aaKnown RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 ICAM3P32942 547 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 NIPA1Q7RTP0 329 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 C4orf32Q8N8J7 132 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 HAS1Q92839 578 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 USP28Q96RU2 1077 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 NRBP1Q9UHY1 535 aa13.44□□□□□ -0.26
RCL1-208ENST00000448872 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 RBBP6Q7Z6E9 1792 aaKnown RBP13.44□□□□□ -0.26
RCL1-208ENST00000448872 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
RCL1-208ENST00000448872 SEPT4O43236 478 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 SETQ01105 290 aaPredicted RBP13.43□□□□□ -0.26
RCL1-208ENST00000448872 TNFAIP2Q03169 654 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
RCL1-208ENST00000448872 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
RCL1-208ENST00000448872 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 ZNF333Q96JL9 665 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 ZNF577Q9BSK1 485 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 GNEQ9Y223 722 aaKnown RBP13.43□□□□□ -0.26
RCL1-208ENST00000448872 MGAMO43451 1857 aa13.43□□□□□ -0.26
RCL1-208ENST00000448872 IPO5O00410 1097 aaKnown RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 CCL5P13501 91 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 AKR1A1P14550 325 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 SP4Q02446 784 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 PTGDRQ13258 359 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 CALCRLQ16602 461 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 CYFIP1Q7L576 1253 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 ARMC5Q96C12 935 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 MTMR9Q96QG7 549 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 HMX1Q9NP08 348 aaPredicted RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 CASP8AP2Q9UKL3 1982 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 MYH6P13533 1939 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 GGPS1O95749 300 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms