RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 TXKP42681 527 aa16.47■□□□□ 0.23
APP-210ENST00000448850 GRIN1Q05586 938 aa16.47■□□□□ 0.23
APP-210ENST00000448850 MTMR1Q13613 665 aa16.47■□□□□ 0.23
APP-210ENST00000448850 KIF22Q14807 665 aa16.47■□□□□ 0.23
APP-210ENST00000448850 IL17AQ16552 155 aa16.47■□□□□ 0.23
APP-210ENST00000448850 NLRX1Q86UT6 975 aa16.47■□□□□ 0.23
APP-210ENST00000448850 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
APP-210ENST00000448850 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
APP-210ENST00000448850 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
APP-210ENST00000448850 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
APP-210ENST00000448850 GPR25O00155 361 aa16.47■□□□□ 0.23
APP-210ENST00000448850 RGS20O76081 388 aa16.47■□□□□ 0.23
APP-210ENST00000448850 HOXC6P09630 235 aa16.47■□□□□ 0.23
APP-210ENST00000448850 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
APP-210ENST00000448850 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
APP-210ENST00000448850 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
APP-210ENST00000448850 NPLOC4Q8TAT6 608 aa16.47■□□□□ 0.23
APP-210ENST00000448850 GPRASP2Q96D09 838 aa16.47■□□□□ 0.23
APP-210ENST00000448850 MAML3Q96JK9 1138 aa16.47■□□□□ 0.23
APP-210ENST00000448850 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
APP-210ENST00000448850 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
APP-210ENST00000448850 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
APP-210ENST00000448850 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
APP-210ENST00000448850 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
APP-210ENST00000448850 MAFGO15525 162 aa16.46■□□□□ 0.23
APP-210ENST00000448850 RGS2P41220 211 aa16.46■□□□□ 0.23
APP-210ENST00000448850 TMEM266Q2M3C6 531 aa16.46■□□□□ 0.23
APP-210ENST00000448850 MAMDC4Q6UXC1 1216 aa16.46■□□□□ 0.23
APP-210ENST00000448850 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
APP-210ENST00000448850 GJA10Q969M2 543 aa16.46■□□□□ 0.23
APP-210ENST00000448850 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
APP-210ENST00000448850 CSRNP2Q9H175 543 aa16.46■□□□□ 0.23
APP-210ENST00000448850 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
APP-210ENST00000448850 PCDHA12Q9UN75 941 aa16.46■□□□□ 0.23
APP-210ENST00000448850 LONP1P36776 959 aaKnown RBP16.45■□□□□ 0.22
APP-210ENST00000448850 TECP42680 631 aa16.45■□□□□ 0.22
APP-210ENST00000448850 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.224e-13■■□□□ 11.5
APP-210ENST00000448850 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
APP-210ENST00000448850 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
APP-210ENST00000448850 SLC5A5Q92911 643 aa16.45■□□□□ 0.22
APP-210ENST00000448850 CDHR1Q96JP9 859 aa16.45■□□□□ 0.22
APP-210ENST00000448850 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
APP-210ENST00000448850 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
APP-210ENST00000448850 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
APP-210ENST00000448850 CYP2B6P20813 491 aa16.45■□□□□ 0.22
APP-210ENST00000448850 CMA1P23946 247 aa16.45■□□□□ 0.22
APP-210ENST00000448850 PDIA5Q14554 519 aa16.45■□□□□ 0.22
APP-210ENST00000448850 MSL3Q8N5Y2 521 aaKnown RBP16.45■□□□□ 0.22
APP-210ENST00000448850 APBA2Q99767 749 aa16.45■□□□□ 0.22
APP-210ENST00000448850 TINF2Q9BSI4 451 aa16.45■□□□□ 0.22
APP-210ENST00000448850 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
APP-210ENST00000448850 ICAM3P32942 547 aa16.44■□□□□ 0.22
APP-210ENST00000448850 CAP1Q01518 475 aa16.44■□□□□ 0.22
APP-210ENST00000448850 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
APP-210ENST00000448850 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
APP-210ENST00000448850 LRCH2Q5VUJ6 765 aa16.44■□□□□ 0.22
APP-210ENST00000448850 RESP18Q5W5W9 173 aa16.44■□□□□ 0.22
APP-210ENST00000448850 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
APP-210ENST00000448850 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
APP-210ENST00000448850 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
APP-210ENST00000448850 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
APP-210ENST00000448850 MRPS27Q92552 414 aaKnown RBP16.44■□□□□ 0.22
APP-210ENST00000448850 AK8Q96MA6 479 aa16.44■□□□□ 0.22
APP-210ENST00000448850 RIT2Q99578 217 aa16.44■□□□□ 0.22
APP-210ENST00000448850 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
APP-210ENST00000448850 FKTNO75072 461 aa16.43■□□□□ 0.22
APP-210ENST00000448850 PSMD10O75832 226 aa16.43■□□□□ 0.22
APP-210ENST00000448850 FSIP1Q8NA03 581 aa16.43■□□□□ 0.22
APP-210ENST00000448850 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
APP-210ENST00000448850 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
APP-210ENST00000448850 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.43■□□□□ 0.22
APP-210ENST00000448850 PKD2L1Q9P0L9 805 aa16.43■□□□□ 0.22
APP-210ENST00000448850 GABRQQ9UN88 632 aa16.43■□□□□ 0.22
APP-210ENST00000448850 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
APP-210ENST00000448850 GAS7O60861 476 aa16.42■□□□□ 0.22
APP-210ENST00000448850 ATP9AO75110 1047 aa16.42■□□□□ 0.22
APP-210ENST00000448850 XRCC5P13010 732 aaKnown RBP16.42■□□□□ 0.22
APP-210ENST00000448850 ITGB3BPQ13352 177 aaPredicted RBP16.42■□□□□ 0.22
APP-210ENST00000448850 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
APP-210ENST00000448850 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
APP-210ENST00000448850 ZNF296Q8WUU4 475 aaPredicted RBP16.42■□□□□ 0.22
APP-210ENST00000448850 TEKT3Q9BXF9 490 aa16.42■□□□□ 0.22
APP-210ENST00000448850 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
APP-210ENST00000448850 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
APP-210ENST00000448850 LRWD1Q9UFC0 647 aa16.42■□□□□ 0.22
APP-210ENST00000448850 VAV3Q9UKW4 847 aa16.42■□□□□ 0.22
APP-210ENST00000448850 LOXHD1Q8IVV2 1947 aa16.42■□□□□ 0.22
APP-210ENST00000448850 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
APP-210ENST00000448850 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
APP-210ENST00000448850 POTEMA6NI47 508 aa16.42■□□□□ 0.22
APP-210ENST00000448850 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
APP-210ENST00000448850 SNAI1O95863 264 aaPredicted RBP16.42■□□□□ 0.22
APP-210ENST00000448850 MBD3O95983 291 aa16.42■□□□□ 0.22
APP-210ENST00000448850 FLT3LGP49771 235 aa16.42■□□□□ 0.22
APP-210ENST00000448850 SPIRE1Q08AE8 756 aa16.42■□□□□ 0.22
APP-210ENST00000448850 OLFML2BQ68BL8 750 aa16.42■□□□□ 0.22
APP-210ENST00000448850 USP49Q70CQ1 688 aa16.42■□□□□ 0.22
APP-210ENST00000448850 OTOP1Q7RTM1 612 aa16.42■□□□□ 0.22
APP-210ENST00000448850 EPSTI1Q96J88 318 aa16.42■□□□□ 0.22
APP-210ENST00000448850 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms