RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
TRA2A-203ENST00000448549 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
TRA2A-203ENST00000448549 SPRED2Q7Z698 418 aa18.03■□□□□ 0.48
TRA2A-203ENST00000448549 SPATA33Q96N06 139 aa18.03■□□□□ 0.48
TRA2A-203ENST00000448549 SENP2Q9HC62 589 aa18.03■□□□□ 0.48
TRA2A-203ENST00000448549 LAMA4Q16363 1823 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 LCHNA4D1U4 455 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
TRA2A-203ENST00000448549 PARNO95453 639 aaKnown RBP18.02■□□□□ 0.48
TRA2A-203ENST00000448549 GGPS1O95749 300 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 CXCL10P02778 98 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 HOXD8P13378 290 aaPredicted RBP18.02■□□□□ 0.48
TRA2A-203ENST00000448549 DEFB103AP81534 67 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 PTK7Q13308 1070 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 HIC1Q14526 733 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 CNKSR3Q6P9H4 555 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 FCHSD1Q86WN1 690 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 SAMD3Q8N6K7 520 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 WNT8BQ93098 351 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 ZBED2Q9BTP6 218 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 TAF6LQ9Y6J9 622 aa18.02■□□□□ 0.48
TRA2A-203ENST00000448549 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
TRA2A-203ENST00000448549 SCN5AQ14524 2016 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 ERICH2A1L162 156 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 CYTH3O43739 400 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 BMP1P13497 986 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 UBA1P22314 1058 aaKnown RBP18.01■□□□□ 0.47
TRA2A-203ENST00000448549 CCND2P30279 289 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 TRIM71Q2Q1W2 868 aaKnown RBP18.01■□□□□ 0.47
TRA2A-203ENST00000448549 ZNF618Q5T7W0 954 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 GPKOWQ92917 476 aaPredicted RBP eCLIP18.01■□□□□ 0.479e-7■□□□□ 8.5
TRA2A-203ENST00000448549 NECAB3Q96P71 396 aaPredicted RBP18.01■□□□□ 0.47
TRA2A-203ENST00000448549 GBF1Q92538 1859 aa18.01■□□□□ 0.47
TRA2A-203ENST00000448549 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 ABHD14A-ACY1A0A1B0GW23 586 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 TGFB3P10600 412 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 CHMLP26374 656 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 KCNQ1P51787 676 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 TROAPQ12815 778 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 TRAF1Q13077 416 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 GRB10Q13322 594 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 AAK1Q2M2I8 961 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 RALYLQ86SE5 291 aaKnown RBP18■□□□□ 0.47
TRA2A-203ENST00000448549 RUFY2Q8WXA3 655 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 C16orf70Q9BSU1 422 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 BCAS3Q9H6U6 928 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 MLXIPQ9HAP2 919 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 MUC3AQ02505 3323 aa18■□□□□ 0.47
TRA2A-203ENST00000448549 E7EWF7 191 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 IKBKEQ14164 716 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 MBTPS1Q14703 1052 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 WTAPQ15007 396 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 NCOA7Q8NI08 942 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 PIBF1Q8WXW3 757 aa17.99■□□□□ 0.47
TRA2A-203ENST00000448549 LPXNO60711 386 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 GJB5O95377 273 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 THPOP40225 353 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
TRA2A-203ENST00000448549 FAM117BQ6P1L5 589 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 RAD9AQ99638 391 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 MTUS1Q9ULD2 1270 aa17.98■□□□□ 0.47
TRA2A-203ENST00000448549 TANC1Q9C0D5 1861 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 H3BRB1 525 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 EFCAB14O75071 495 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 LGR5O75473 907 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 ANTXR2P58335 489 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 MRPS9P82933 396 aaKnown RBP17.97■□□□□ 0.47
TRA2A-203ENST00000448549 CATIPQ7Z7H3 387 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 SERINC5Q86VE9 423 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 TUT1Q9H6E5 874 aaKnown RBP17.97■□□□□ 0.47
TRA2A-203ENST00000448549 COG5Q9UP83 839 aa17.97■□□□□ 0.47
TRA2A-203ENST00000448549 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
TRA2A-203ENST00000448549 MYO9BQ13459 2157 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 C17orf102A2RUQ5 167 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 RSPH10B2B2RC85 870 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 SGSM2O43147 1006 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 LGALS2P05162 132 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 RSPH10BP0C881 870 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 COL9A1P20849 921 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 GNPTABQ3T906 1256 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■■■■■ 30.1
TRA2A-203ENST00000448549 DBF4BQ8NFT6 615 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 IGDCC4Q8TDY8 1250 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 ATP6V0A1Q93050 837 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 RTEL1Q9NZ71 1219 aa17.96■□□□□ 0.47
TRA2A-203ENST00000448549 LINC01553A4QN01 128 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 SPATA31C2B4DYI2 1134 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 NOP56O00567 594 aaKnown RBP17.95■□□□□ 0.46
TRA2A-203ENST00000448549 SMIM10L2AP0DMW4 78 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 SMIM10L2BP0DMW5 78 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 CYFIP1Q7L576 1253 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 HLA-CQ95604 372 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
TRA2A-203ENST00000448549 RNPEPQ9H4A4 650 aa17.95■□□□□ 0.46
TRA2A-203ENST00000448549 SUGCTQ9HAC7 445 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms