RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HAS3O00219 553 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 SELPP16109 830 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 CCND2P30279 289 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 HSDL1Q3SXM5 330 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 CELF3Q5SZQ8 465 aaKnown RBP32.76■■■□□ 2.83
CBX4-202ENST00000448310 LRRC8DQ7L1W4 858 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 CATIPQ7Z7H3 387 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 IGDCC4Q8TDY8 1250 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 SYMPKQ92797 1274 aaKnown RBP32.76■■■□□ 2.83
CBX4-202ENST00000448310 MAP4K1Q92918 833 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 SPATA33Q96N06 139 aa32.76■■■□□ 2.83
CBX4-202ENST00000448310 RBM8AQ9Y5S9 174 aaKnown RBP32.76■■■□□ 2.83
CBX4-202ENST00000448310 UBA1P22314 1058 aaKnown RBP32.75■■■□□ 2.83
CBX4-202ENST00000448310 ZNF200P98182 395 aaPredicted RBP32.75■■■□□ 2.83
CBX4-202ENST00000448310 TRAF1Q13077 416 aa32.75■■■□□ 2.83
CBX4-202ENST00000448310 HERC6Q8IVU3 1022 aa32.75■■■□□ 2.83
CBX4-202ENST00000448310 MICALL1Q8N3F8 863 aa32.75■■■□□ 2.83
CBX4-202ENST00000448310 MYL10Q9BUA6 226 aa32.75■■■□□ 2.83
CBX4-202ENST00000448310 RFXAPO00287 272 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 ARHGEF15O94989 841 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 CKBP12277 381 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 KCNV1Q6PIU1 500 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 PHOSPHO2Q8TCD6 241 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 THEGQ9P2T0 379 aa32.74■■■□□ 2.83
CBX4-202ENST00000448310 HOXD8P13378 290 aaPredicted RBP32.73■■■□□ 2.83
CBX4-202ENST00000448310 WNT8BQ93098 351 aa32.73■■■□□ 2.83
CBX4-202ENST00000448310 PRRC2BQ5JSZ5 2229 aaKnown RBP32.73■■■□□ 2.83
CBX4-202ENST00000448310 PPFIA4O75335 1185 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 BAIAP3O94812 1187 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 RBL2Q08999 1139 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 HIC1Q14526 733 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 BCAS3Q9H6U6 928 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 LY9Q9HBG7 655 aa32.72■■■□□ 2.83
CBX4-202ENST00000448310 TRANK1O15050 2925 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 NBNO60934 754 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 KCNJ6P48051 423 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 TCTN1Q2MV58 587 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 TMCO2Q7Z6W1 182 aaPredicted RBP32.71■■■□□ 2.83
CBX4-202ENST00000448310 ZNF654Q8IZM8 581 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 MLXIPQ9HAP2 919 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 REV3LO60673 3130 aa32.71■■■□□ 2.83
CBX4-202ENST00000448310 EPOPA6NHQ4 379 aa32.7■■■□□ 2.83
CBX4-202ENST00000448310 TGFB3P10600 412 aa32.7■■■□□ 2.83
CBX4-202ENST00000448310 WDR5P61964 334 aaKnown RBP32.7■■■□□ 2.83
CBX4-202ENST00000448310 PTK7Q13308 1070 aa32.7■■■□□ 2.83
CBX4-202ENST00000448310 ATXN2LQ8WWM7 1075 aaKnown RBP32.7■■■□□ 2.83
CBX4-202ENST00000448310 KIF28PB7ZC32 967 aa32.69■■■□□ 2.82
CBX4-202ENST00000448310 MRPS9P82933 396 aaKnown RBP32.69■■■□□ 2.82
CBX4-202ENST00000448310 TAP1Q03518 808 aa32.69■■■□□ 2.82
CBX4-202ENST00000448310 COL9A3Q14050 684 aaPredicted RBP32.69■■■□□ 2.82
CBX4-202ENST00000448310 TRIM71Q2Q1W2 868 aaKnown RBP32.69■■■□□ 2.82
CBX4-202ENST00000448310 C16orf70Q9BSU1 422 aa32.69■■■□□ 2.82
CBX4-202ENST00000448310 PRC1O43663 620 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 CXCL10P02778 98 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 DEFB103AP81534 67 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 ZNF618Q5T7W0 954 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 CNKSR3Q6P9H4 555 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 TRAF7Q6Q0C0 670 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 SPRED2Q7Z698 418 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 CTCFLQ8NI51 663 aaPredicted RBP32.68■■■□□ 2.82
CBX4-202ENST00000448310 ARNTL2Q8WYA1 636 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 RTEL1Q9NZ71 1219 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 FRMPD4Q14CM0 1322 aa32.68■■■□□ 2.82
CBX4-202ENST00000448310 TLL1O43897 1013 aa32.67■■■□□ 2.82
CBX4-202ENST00000448310 DDAH1O94760 285 aa32.67■■■□□ 2.82
CBX4-202ENST00000448310 CASC1Q6TDU7 716 aa32.67■■■□□ 2.82
CBX4-202ENST00000448310 ASB2Q96Q27 587 aa32.67■■■□□ 2.82
CBX4-202ENST00000448310 SPZ1Q9BXG8 430 aa32.67■■■□□ 2.82
CBX4-202ENST00000448310 PARNO95453 639 aaKnown RBP32.66■■■□□ 2.82
CBX4-202ENST00000448310 USP17L6PQ6QN14 398 aa32.66■■■□□ 2.82
CBX4-202ENST00000448310 RRP36Q96EU6 259 aaKnown RBP32.66■■■□□ 2.82
CBX4-202ENST00000448310 LSG1Q9H089 658 aaKnown RBP32.66■■■□□ 2.82
CBX4-202ENST00000448310 COL4A4P53420 1690 aaPredicted RBP32.66■■■□□ 2.82
CBX4-202ENST00000448310 LCHNA4D1U4 455 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 PLEKHA8P1O95397 391 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 SEMA3FQ13275 785 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 MBTPS1Q14703 1052 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 GNPTABQ3T906 1256 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 KRT40Q6A162 431 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 SMARCC2Q8TAQ2 1214 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 INPP4AQ96PE3 977 aaPredicted RBP32.65■■■□□ 2.82
CBX4-202ENST00000448310 MAP3K14Q99558 947 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 MTCH2Q9Y6C9 303 aa32.65■■■□□ 2.82
CBX4-202ENST00000448310 LGALS2P05162 132 aa32.64■■■□□ 2.82
CBX4-202ENST00000448310 RXRAP19793 462 aa32.64■■■□□ 2.82
CBX4-202ENST00000448310 KIF5BP33176 963 aa32.64■■■□□ 2.82
CBX4-202ENST00000448310 MRPS5P82675 430 aaKnown RBP32.64■■■□□ 2.82
CBX4-202ENST00000448310 NFXL1Q6ZNB6 911 aa32.64■■■□□ 2.82
CBX4-202ENST00000448310 CMTR1Q8N1G2 835 aaKnown RBP32.64■■■□□ 2.82
CBX4-202ENST00000448310 TCF20Q9UGU0 1960 aaKnown RBP32.64■■■□□ 2.82
CBX4-202ENST00000448310 SPATA31C2B4DYI2 1134 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 H3BRB1 525 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 NOP56O00567 594 aaKnown RBP32.63■■■□□ 2.81
CBX4-202ENST00000448310 SH2B2O14492 632 aaPredicted RBP32.63■■■□□ 2.81
CBX4-202ENST00000448310 ICAM3P32942 547 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 CYFIP1Q7L576 1253 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 RAB11FIP4Q86YS3 637 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 ZBED2Q9BTP6 218 aa32.63■■■□□ 2.81
CBX4-202ENST00000448310 TUT1Q9H6E5 874 aaKnown RBP32.63■■■□□ 2.81
CBX4-202ENST00000448310 TELO2Q9Y4R8 837 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms