RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 GRIN2AQ12879 1464 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 FAM187AA6NFU0 413 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 GMNNO75496 209 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 COPS2P61201 443 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 CASKIN2Q8WXE0 1202 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 NAP1L4Q99733 375 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 PRMT1Q99873 361 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 MAP3K19Q56UN5 1328 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 PALMDQ9NP74 551 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 STK24Q9Y6E0 443 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 ART3Q13508 389 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 DNM3Q9UQ16 869 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 SNRNP27Q8WVK2 155 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 ZIM3Q96PE6 472 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 CHP1Q99653 195 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 TECP42680 631 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 DAB2IPQ5VWQ8 1189 aa8.53□□□□□ -1.04
SMG1-202ENST00000446231 AENQ8WTP8 325 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 TGS1Q96RS0 853 aaKnown RBP8.53□□□□□ -1.04
SMG1-202ENST00000446231 FAM170AA1A519 330 aa8.52□□□□□ -1.04
SMG1-202ENST00000446231 CASP1P29466 404 aa8.52□□□□□ -1.04
SMG1-202ENST00000446231 CTAGE3PQ8IX95 158 aa8.52□□□□□ -1.04
SMG1-202ENST00000446231 KDM5CP41229 1560 aa8.52□□□□□ -1.04
SMG1-202ENST00000446231 DAPK3O43293 454 aa8.52□□□□□ -1.04
SMG1-202ENST00000446231 ACEP12821 1306 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 KCNQ3O43525 872 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 DCTN3O75935 186 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 NCAPHQ15003 741 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 TMOD2Q9NZR1 351 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 CACNA2D1P54289 1103 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 NR5A1Q13285 461 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ANKRD20A4Q4UJ75 823 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ANKRD20A2Q5SQ80 823 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ANKRD20A1Q5TYW2 823 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 LZICQ8WZA0 190 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 A1CFQ9NQ94 594 aaKnown RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 MBD5Q9P267 1494 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 BCRP11274 1271 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ATF3P18847 181 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ATP4AP20648 1035 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 PRCPP42785 496 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 TMED10P49755 219 aaKnown RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 STX8Q9UNK0 236 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 COL4A3BPQ9Y5P4 624 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 LIFRP42702 1097 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ADCY7P51828 1080 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 ELF3P78545 371 aaPredicted RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 LCA5Q86VQ0 697 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 LRRC34Q8IZ02 419 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 APOA5Q6Q788 366 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 GFM2Q969S9 779 aaKnown RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 GRK7Q8WTQ7 553 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 LRGUKQ96M69 825 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 CDC25AP30304 524 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 MMP14P50281 582 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 NUGGCQ68CJ6 796 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 DYMQ7RTS9 669 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 USP6NLQ92738 828 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 FERMT1Q9BQL6 677 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 NDST4Q9H3R1 872 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 TXNDC16Q9P2K2 825 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 TUBE1Q9UJT0 475 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 KPNB1Q14974 876 aaKnown RBP8.52□□□□□ -1.05
SMG1-202ENST00000446231 FAM133AQ8N9E0 248 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 EHD4Q9H223 541 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 TBK1Q9UHD2 729 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
SMG1-202ENST00000446231 CCNE1P24864 410 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 HNRNPCL1O60812 293 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 TYW1Q9NV66 732 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 PANK4Q9NVE7 773 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 E7ENQ6 273 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 EXOC3L4Q17RC7 722 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ITIH6Q6UXX5 1313 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 SYT2Q8N9I0 419 aaPredicted RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 CCDC68Q9H2F9 335 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 CFAP69A5D8W1 941 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ANO5Q75V66 913 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 CCDC188H7C350 402 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PROSER3Q2NL68 480 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ERP27Q96DN0 273 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 NAF1Q96HR8 494 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 EHD2Q9NZN4 543 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 POC1B-GALNT4F8VUJ3 575 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PLCG1P19174 1290 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 FAM81AQ8TBF8 368 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 METTL14Q9HCE5 456 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms