RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 MBTPS1Q14703 1052 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 KIAA0753Q2KHM9 967 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 HSDL1Q3SXM5 330 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 STOX1Q6ZVD7 989 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 C7orf31Q8N865 590 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
SMARCAL1-210ENST00000445153 MYH6P13533 1939 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 ZBTB5O15062 677 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 CYTH3O43739 400 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 TLL1O43897 1013 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 COL9A1P20849 921 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 MFSD10Q14728 455 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 PGM5Q15124 567 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 PPTC7Q8NI37 304 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 PIGSQ96S52 555 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
SMARCAL1-210ENST00000445153 XIRP2A4UGR9 3374 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 TRANK1O15050 2925 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 KCNJ6P48051 423 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 PTH1RQ03431 593 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 CELF3Q5SZQ8 465 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 CNKSR3Q6P9H4 555 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 RIOX1Q9H6W3 641 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
SMARCAL1-210ENST00000445153 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 GGPS1O95749 300 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 CYP21A2P08686 494 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 PTK7Q13308 1070 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 SPATA33Q96N06 139 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 MAP3K20Q9NYL2 800 aaKnown RBP16.47■□□□□ 0.23
SMARCAL1-210ENST00000445153 UBA1P22314 1058 aaKnown RBP16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 GRM4Q14833 912 aa16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 KATNAL1Q9BW62 490 aa16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
SMARCAL1-210ENST00000445153 NCOR1O75376 2440 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 ABHD14A-ACY1A0A1B0GW23 586 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 GJB5O95377 273 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 TROAPQ12815 778 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 TTC22Q5TAA0 569 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 ZBED2Q9BTP6 218 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 SUGCTQ9HAC7 445 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 BDP1A6H8Y1 2624 aa16.45■□□□□ 0.22
SMARCAL1-210ENST00000445153 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 PARNO95453 639 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 CHMLP26374 656 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 MRPS9P82933 396 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 MKRN4PQ13434 485 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 IKBKEQ14164 716 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 SERINC5Q86VE9 423 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 RAD9AQ99638 391 aa16.44■□□□□ 0.22
SMARCAL1-210ENST00000445153 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 E7EWF7 191 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 LGR5O75473 907 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 TGFB3P10600 412 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 ANTXR2P58335 489 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 ERVK-21P61565 698 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 AAK1Q2M2I8 961 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 KCNV1Q6PIU1 500 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 SAMD3Q8N6K7 520 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 PIBF1Q8WXW3 757 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 HLA-CQ95604 372 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 COG5Q9UP83 839 aa16.43■□□□□ 0.22
SMARCAL1-210ENST00000445153 H3BRB1 525 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 TREHO43280 583 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 CCND2P30279 289 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 HOXC8P31273 242 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 THPOP40225 353 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 TUT1Q9H6E5 874 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms