RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
HMGN1-208ENST00000443046 CFAP54Q96N23 3096 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 C19orf67A6NJJ6 358 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 H3BNC9 293 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 DCXO43602 365 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 PPFIA4O75335 1185 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 RGS20O76081 388 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 AMHP03971 560 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 ZNF286BP0CG31 522 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 HOXC8P31273 242 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 GHRHRQ02643 423 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 PABPC5Q96DU9 382 aaKnown RBP16.85■□□□□ 0.29
HMGN1-208ENST00000443046 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
HMGN1-208ENST00000443046 MYH6P13533 1939 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 H3BQ06 376 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-208ENST00000443046 NR3C2P08235 984 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 MRE11P49959 708 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 HAND2P61296 217 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 NHLH1Q02575 133 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 ZP2Q05996 745 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 PTPROQ16827 1216 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 TIGD5Q53EQ6 642 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 MYSM1Q5VVJ2 828 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 TBC1D10CQ8IV04 446 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 BANK1Q8NDB2 785 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 ANKS1AQ92625 1134 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 TOP1MTQ969P6 601 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 PRKAG3Q9UGI9 489 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 NLRC5Q86WI3 1866 aa16.84■□□□□ 0.29
HMGN1-208ENST00000443046 OPLAHO14841 1288 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 EIF2AK2P19525 551 aaKnown RBP16.83■□□□□ 0.28
HMGN1-208ENST00000443046 QRICH1Q2TAL8 776 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 ZNF589Q86UQ0 364 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-208ENST00000443046 DHX37Q8IY37 1157 aaKnown RBP16.83■□□□□ 0.28
HMGN1-208ENST00000443046 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 C16orf70Q9BSU1 422 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 MRVI1Q9Y6F6 885 aa16.83■□□□□ 0.28
HMGN1-208ENST00000443046 ATG2AQ2TAZ0 1938 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 RALGAPA2Q2PPJ7 1873 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 LTBRP36941 435 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 NT5C2P49902 561 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 HSD17B4P51659 736 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 GPM6BQ13491 265 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 TCEAL5Q5H9L2 206 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 CELF3Q5SZQ8 465 aaKnown RBP16.82■□□□□ 0.28
HMGN1-208ENST00000443046 TMEM192Q8IY95 271 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 FBXL18Q96ME1 805 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 ZKSCAN3Q9BRR0 538 aa16.82■□□□□ 0.28
HMGN1-208ENST00000443046 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
HMGN1-208ENST00000443046 NEDD4P46934 1319 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-208ENST00000443046 THPOP40225 353 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 SP2Q02086 613 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 CSPP1Q1MSJ5 1256 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 CTC1Q2NKJ3 1217 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 KCNV1Q6PIU1 500 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 STOX1Q6ZVD7 989 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 ADHFE1Q8IWW8 467 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 ESR2Q92731 530 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 UIMC1Q96RL1 719 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-208ENST00000443046 NSUN3Q9H649 340 aaKnown RBP16.81■□□□□ 0.28
HMGN1-208ENST00000443046 JMJD4Q9H9V9 463 aa16.81■□□□□ 0.28
HMGN1-208ENST00000443046 CAND2O75155 1236 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 PDCD2LQ9BRP1 358 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
HMGN1-208ENST00000443046 FAM50BQ9Y247 325 aa16.8■□□□□ 0.28
HMGN1-208ENST00000443046 CCDC171Q6TFL3 1326 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 NCK2O43639 380 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 TGFB3P10600 412 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 PDE1AP54750 535 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-208ENST00000443046 SEPT8Q92599 483 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 YME1L1Q96TA2 773 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 TECTAO75443 2155 aa16.79■□□□□ 0.28
HMGN1-208ENST00000443046 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
HMGN1-208ENST00000443046 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms