RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CHMP5Q9NZZ3 219 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 CIZ1Q9ULV3 898 aaPredicted RBP15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
TM9SF4-204ENST00000442842 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 MARCH6O60337 910 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 TXNP10599 105 aaKnown RBP15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 AKR1A1P14550 325 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 PTGS1P23219 599 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 CEBPZQ03701 1054 aaKnown RBP15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 LY6KQ17RY6 165 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 CCDC144BQ3MJ40 725 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 Q4G0T1 1027 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 GJC2Q5T442 439 aaPredicted RBP15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 MOXD1Q6UVY6 613 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 CDHR1Q96JP9 859 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 ZNF577Q9BSK1 485 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 NRBP1Q9UHY1 535 aa15.38■□□□□ 0.05
TM9SF4-204ENST00000442842 CYP3A7-CYP3A51PA0A087WV96 503 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 MEIS1O00470 390 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 UBA1P22314 1058 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 CYP3A7P24462 503 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 SP4Q02446 784 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 TMEM63BQ5T3F8 832 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 MAP3K21Q5TCX8 1036 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 NIPA1Q7RTP0 329 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 COPS5Q92905 334 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 GJA10Q969M2 543 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 LENG9Q96B70 501 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 AGO4Q9HCK5 861 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 KCNH7Q9NS40 1196 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-204ENST00000442842 SPATA31C2B4DYI2 1134 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 MSH4O15457 936 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 ADCY6O43306 1168 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 SMPD1P17405 629 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 TNFAIP2Q03169 654 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 CALCRLQ16602 461 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 MBOAT7Q96N66 472 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 ZNF396Q96N95 335 aaPredicted RBP15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■□□□□ 11.1
TM9SF4-204ENST00000442842 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 HMX1Q9NP08 348 aaPredicted RBP15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
TM9SF4-204ENST00000442842 RBM47A0AV96 593 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 IPO5O00410 1097 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 SEPT4O43236 478 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 CHMP2AO43633 222 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 ATP9AO75110 1047 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 GGPS1O95749 300 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 OR52Z1P0C646 297 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 CCL5P13501 91 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 KCNA2P16389 499 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 ICAM3P32942 547 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 DNM1Q05193 864 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 ITGB3BPQ13352 177 aaPredicted RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 MTFR1Q15390 333 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 OR6J1Q8NGC5 347 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 SDF4Q9BRK5 362 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 TMEM60Q9H2L4 133 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 TCEAL9Q9UHQ7 104 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 DDX41Q9UJV9 622 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 CEP131Q9UPN4 1083 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 ATP6V1DQ9Y5K8 247 aa15.35■□□□□ 0.05
TM9SF4-204ENST00000442842 BAG4O95429 457 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 RARBP10826 455 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 SP2Q02086 613 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 LRCH2Q5VUJ6 765 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 IQSEC1Q6DN90 963 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 CCDC62Q6P9F0 684 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 CYFIP1Q7L576 1253 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 DHX37Q8IY37 1157 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 RNF208Q9H0X6 261 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 MLXIPQ9HAP2 919 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 DDX20Q9UHI6 824 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 MYH7BA7E2Y1 1941 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 DOCK3Q8IZD9 2030 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 CENPFP49454 3210 aa15.34■□□□□ 0.05
TM9SF4-204ENST00000442842 MAFGO15525 162 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 GAS7O60861 476 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 GH1P01241 217 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 TXKP42681 527 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 PTGDRQ13258 359 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms